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      Phylogeography and demographic history of the Chagas disease vector Rhodnius nasutus (Hemiptera: Reduviidae) in the Brazilian Caatinga biome

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          Abstract

          Background

          Rhodnius nasutus, a vector of the etiological agent Trypanosoma cruzi, is one of the epidemiologically most relevant triatomine species of the Brazilian Caatinga, where it often colonizes rural peridomestic structures such as chicken coops and occasionally invades houses. Historical colonization and determination of its genetic diversity and population structure may provide new information towards the improvement of vector control in the region. In this paper we present thoughtful analyses considering the phylogeography and demographic history of R. nasutus in the Caatinga.

          Methodology/Principal findings

          A total of 157 R. nasutus specimens were collected from Copernicia prunifera palm trees in eight geographic localities within the Brazilian Caatinga biome, sequenced for 595-bp fragment of the mitochondrial cytochrome b gene (cyt b) and genotyped for eight microsatellite loci. Sixteen haplotypes were detected in the cyt b sequences, two of which were shared among different localities. Molecular diversity indices exhibited low diversity levels and a haplotype network revealed low divergence among R. nasutus sequences, with two central haplotypes shared by five of the eight populations analyzed. The demographic model that better represented R. nasutus population dynamics was the exponential growth model. Results of the microsatellite data analyses indicated that the entire population is comprised of four highly differentiated groups, with no obvious contemporary geographic barriers that could explain the population substructure detected. A complex pattern of migration was observed, in which a western Caatinga population seems to be the source of emigrants to the eastern populations.

          Conclusions/Significance

          R. nasutus that inhabit C. prunifera palms do not comprise a species complex. The species went through a population expansion at 12–10 ka, during the Holocene, which coincides with end of the largest dry season in South America. It colonized the Caatinga in a process that occurred from west to east in the region. R. nasutus is presently facing an important ecological impact caused by the continuous deforestation of C. prunifera palms in northeast Brazil. We hypothesize that this ecological disturbance might contribute to an increase in the events of invasion and colonization of human habitations.

          Author summary

          Chagas disease is endemic to Latin America and the Caribbean and it is estimated that 6–7 million people are infected with the etiological agent Trypanosoma cruzi. Although new community-based ecosystem management (ecohealth) initiatives have been implemented, vector control based on insecticide-spraying of households remains one of the most effective strategies to diminish parasite transmission to humans. However, this strategy is not sustainable where native triatomine species are capable of colonizing peridomestic structures and invading human dwellings. The application of molecular markers with the potential of recovering both historical and contemporary information on vector population structure and diversity can improve the understanding of vector dissemination and thus contribute to the development of better disease control strategies. In this study we analyzed Rhodnius nasutus populations endemic to the Brazilian Caatinga biome using two sets of markers: a fragment of the mitochondrial gene cytochrome b and eight nuclear microsatellite loci. The information generated and described herein is important as it may contribute to the advancement of our understanding of Chagas disease vector ecology and phylogeography.

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          Most cited references52

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            Individual Comparisons by Ranking Methods

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              Dating of the human-ape splitting by a molecular clock of mitochondrial DNA.

              A new statistical method for estimating divergence dates of species from DNA sequence data by a molecular clock approach is developed. This method takes into account effectively the information contained in a set of DNA sequence data. The molecular clock of mitochondrial DNA (mtDNA) was calibrated by setting the date of divergence between primates and ungulates at the Cretaceous-Tertiary boundary (65 million years ago), when the extinction of dinosaurs occurred. A generalized least-squares method was applied in fitting a model to mtDNA sequence data, and the clock gave dates of 92.3 +/- 11.7, 13.3 +/- 1.5, 10.9 +/- 1.2, 3.7 +/- 0.6, and 2.7 +/- 0.6 million years ago (where the second of each pair of numbers is the standard deviation) for the separation of mouse, gibbon, orangutan, gorilla, and chimpanzee, respectively, from the line leading to humans. Although there is some uncertainty in the clock, this dating may pose a problem for the widely believed hypothesis that the pipedal creature Australopithecus afarensis, which lived some 3.7 million years ago at Laetoli in Tanzania and at Hadar in Ethiopia, was ancestral to man and evolved after the human-ape splitting. Another likelier possibility is that mtDNA was transferred through hybridization between a proto-human and a proto-chimpanzee after the former had developed bipedalism.
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                Author and article information

                Contributors
                Role: ConceptualizationRole: Formal analysisRole: SoftwareRole: VisualizationRole: Writing – original draft
                Role: ConceptualizationRole: Formal analysisRole: SoftwareRole: Writing – original draftRole: Writing – review & editing
                Role: Formal analysisRole: MethodologyRole: Software
                Role: ConceptualizationRole: Funding acquisitionRole: ResourcesRole: Writing – review & editing
                Role: Funding acquisitionRole: Resources
                Role: ConceptualizationRole: Funding acquisitionRole: ResourcesRole: SupervisionRole: Writing – review & editing
                Role: Editor
                Journal
                PLoS Negl Trop Dis
                PLoS Negl Trop Dis
                plos
                plosntds
                PLoS Neglected Tropical Diseases
                Public Library of Science (San Francisco, CA USA )
                1935-2727
                1935-2735
                24 September 2018
                September 2018
                : 12
                : 9
                : e0006731
                Affiliations
                [1 ] Laboratório de Epidemiologia e Sistemática Molecular, Instituto Oswaldo Cruz, Fiocruz, Rio de Janeiro, Brazil
                [2 ] Laboratory of Molecular Systematics, Limnological Institute of the Siberian Branch of the Russian Academy of Sciences, Irkutsk, Russia
                [3 ] Laboratório de Mosquitos Transmissores de Hematozoários, Instituto Oswaldo Cruz, Fiocruz, Rio de Janeiro, Brazil
                [4 ] Laboratório de Parasitologia Médica e Biologia de Vetores, Faculdade de Medicina, Universidade de Brasília, Brasília, Distrito Federal, Brazil
                [5 ] Laboratório de Ecoepidemiologia da doença de Chagas, Instituto Oswaldo Cruz, Fiocruz, Rio de Janeiro, RJ, Brazil
                Universidad de Buenos Aires, ARGENTINA
                Author notes

                The authors have declared that no competing interests exist.

                Author information
                http://orcid.org/0000-0002-5699-242X
                http://orcid.org/0000-0001-6758-1557
                Article
                PNTD-D-18-00004
                10.1371/journal.pntd.0006731
                6195287
                30248092
                6e1870b3-27ab-4517-9cfd-f779d7f39ddd
                © 2018 Peretolchina et al

                This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

                History
                : 1 January 2018
                : 3 August 2018
                Page count
                Figures: 5, Tables: 7, Pages: 22
                Funding
                This study was funded by Instituto Nacional de Ciência e Tecnologia em Entomologia Molecular and by the Fundação Oswaldo Cruz of Brazil. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
                Categories
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                Biology and Life Sciences
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                Heredity
                Genetic Mapping
                Haplotypes
                Biology and Life Sciences
                Biogeography
                Phylogeography
                Ecology and Environmental Sciences
                Biogeography
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                Earth Sciences
                Geography
                Biogeography
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                Evolutionary Biology
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                Phylogeography
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                Computer and Information Sciences
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                Taxonomy
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                Phylogenetics
                Phylogenetic Analysis
                Research and Analysis Methods
                Animal Studies
                Experimental Organism Systems
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                Rhodnius
                Medicine and Health Sciences
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                Custom metadata
                vor-update-to-uncorrected-proof
                2018-10-19
                GenBank accession numbers of R. nasutus sequences generated for this study are MG734978-MG735124.

                Infectious disease & Microbiology
                Infectious disease & Microbiology

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