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      Differential Regulation of Single Microtubules and Bundles by a Three-Protein Module

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          Abstract

          A remarkable feature of the microtubule cytoskeleton is co-existence of sub-populations having different dynamic properties. A prominent example is the anaphase spindle, where stable antiparallel bundles exist alongside dynamic microtubules and provide spatial cues for cytokinesis. How are dynamics of spatially proximal arrays differentially regulated? We reconstitute a minimal system of three midzone proteins: microtubule-crosslinker PRC1, and its interactors CLASP1 and Kif4A, proteins that promote and suppress microtubule elongation, respectively. We find their collective activity promotes elongation of single microtubules, while simultaneously stalling polymerization of crosslinked bundles. This differentiation arises from (i) Strong rescue activity of CLASP1, which overcomes weaker effects of Kif4A on single microtubules, (ii) Lower microtubule and PRC1-binding affinity of CLASP1, which permit dominance of Kif4A at overlaps. In addition to canonical mechanisms where antagonistic regulators set microtubule lengths, our findings illuminate design principles by which collective regulator activity creates microenvironments of arrays with distinct dynamic properties.

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          Analysis of Macromolecular Polydispersity in Intensity Correlation Spectroscopy: The Method of Cumulants

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            Preparation of modified tubulins.

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              Insights into antiparallel microtubule crosslinking by PRC1, a conserved nonmotor microtubule binding protein.

              Formation of microtubule architectures, required for cell shape maintenance in yeast, directional cell expansion in plants and cytokinesis in eukaryotes, depends on antiparallel microtubule crosslinking by the conserved MAP65 protein family. Here, we combine structural and single molecule fluorescence methods to examine how PRC1, the human MAP65, crosslinks antiparallel microtubules. We find that PRC1's microtubule binding is mediated by a structured domain with a spectrin-fold and an unstructured Lys/Arg-rich domain. These two domains, at each end of a homodimer, are connected by a linkage that is flexible on single microtubules, but forms well-defined crossbridges between antiparallel filaments. Further, we show that PRC1 crosslinks are compliant and do not substantially resist filament sliding by motor proteins in vitro. Together, our data show how MAP65s, by combining structural flexibility and rigidity, tune microtubule associations to establish crosslinks that selectively "mark" antiparallel overlap in dynamic cytoskeletal networks. Copyright 2010 Elsevier Inc. All rights reserved.
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                Author and article information

                Journal
                101231976
                32624
                Nat Chem Biol
                Nat Chem Biol
                Nature chemical biology
                1552-4450
                1552-4469
                25 April 2021
                03 June 2021
                September 2021
                03 December 2021
                : 17
                : 9
                : 964-974
                Affiliations
                [1 ]Department of Molecular Biology, Massachusetts General Hospital, Boston, MA 02114, USA
                [2 ]Department of Genetics, Harvard Medical School, Boston, MA 02115, USA
                Author notes

                AUTHOR CONTRIBUTION STATEMENT

                RS conceptualized researched; NM & AEN purified recombinant proteins. SJ, NM & RS designed all TIRF microscopy experiments. SJ performed and analyzed data from single microtubule and dynamic bundle TIRF assays. NM performed dynamic bundle TIRF assays with 2 labeled proteins and EB3 protein, and NM & SSW analyzed data. SSW designed and performed single molecule TIRF experiments and analyzed data. NM designed BLI experiments and NM & AEN performed all biochemical assays. NM, SJ and RS wrote the original draft. All authors reviewed and edited the manuscript.

                Article
                NIHMS1695641
                10.1038/s41589-021-00800-y
                8387365
                34083810
                6fabc435-6719-4f51-9d87-ca06eed42eb0

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                Biochemistry
                Biochemistry

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