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      Investigation of Physicochemical Indices and Microbial Communities in Termite Fungus-Combs

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          Abstract

          Termitomyces species are wild edible mushrooms that possess high nutritional value and a wide range of medicinal properties. However, the cultivation of these mushrooms is very difficult because of their symbiotic association with termites. In this study, we aimed to examine the differences in physicochemical indices and microbial communities between combs with Termitomyces basidiomes (CF) and combs without Termitomyces basidiomes (CNF). High-performance liquid chromatography (HPLC), inductively coupled plasma optical emission spectrometry (ICP-OES), gas chromatography equipped with a flame ionization detector (GC-FID), some commercial kits, high-throughput sequencing of the 16s RNA, and internal transcribed spacer (ITS) were used. Humidity, pH, and elements, i.e., Al, Ba, Fe, Mn, Ni, S, Ca, and Mg were higher while amino acids particularly alanine, tyrosine, and isoleucine were lower in CF as compared to CNF. The average contents of fatty acids were not significantly different between the two comb categories. The bacterial genera Alistipes, Burkholderia, Sediminibacterium, and Thermus were dominant in all combs. Brevibacterium, Brevundimonas, and Sediminibacterium were significantly more abundant in CF. Basidiomycota and Ascomycota were also identified in combs. Termitomyces clypeatus, Termitomyces sp. Group3, and Termitomyces sp. were the most dominant species in combs. However, any single Termitomyces species was abundantly present in an individual comb.

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          Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing

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            The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

            SILVA (from Latin silva, forest, http://www.arb-silva.de) is a comprehensive web resource for up to date, quality-controlled databases of aligned ribosomal RNA (rRNA) gene sequences from the Bacteria, Archaea and Eukaryota domains and supplementary online services. The referred database release 111 (July 2012) contains 3 194 778 small subunit and 288 717 large subunit rRNA gene sequences. Since the initial description of the project, substantial new features have been introduced, including advanced quality control procedures, an improved rRNA gene aligner, online tools for probe and primer evaluation and optimized browsing, searching and downloading on the website. Furthermore, the extensively curated SILVA taxonomy and the new non-redundant SILVA datasets provide an ideal reference for high-throughput classification of data from next-generation sequencing approaches.
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              A Mathematical Theory of Communication

              C. Shannon (1948)
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                Author and article information

                Contributors
                Journal
                Front Microbiol
                Front Microbiol
                Front. Microbiol.
                Frontiers in Microbiology
                Frontiers Media S.A.
                1664-302X
                15 January 2021
                2020
                : 11
                : 581219
                Affiliations
                [1] 1Ministry of Agriculture Key Laboratory of Molecular Biology of Crop Pathogens and Insect Pests, Institute of Insect Sciences, College of Agriculture and Biotechnology, Zhejiang University , Hangzhou, China
                [2] 2Entomology Section, Central Cotton Research Institute , Sakrand, Pakistan
                [3] 3Department of Entomology, Faculty of Veterinary and Animal Husbandry, Somali National University , Mogadishu, Somalia
                Author notes

                Edited by: Olivier Raspé, Mae Fah Luang University, Thailand

                Reviewed by: Samantha Chandranath Karunarathna, Kunming Institute of Botany, China; Kandikere Ramaiah Sridhar, Mangalore University, India

                *Correspondence: Jianchu Mo, mojianchu@ 123456zju.edu.cn

                This article was submitted to Fungi and Their Interactions, a section of the journal Frontiers in Microbiology

                Article
                10.3389/fmicb.2020.581219
                7843810
                33519727
                7a36951c-2aa8-40fb-93d3-bac6e430e29b
                Copyright © 2021 Yang, Ahmad, Zhou, Guo, Liang, Gaal and Mo.

                This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

                History
                : 08 July 2020
                : 14 December 2020
                Page count
                Figures: 5, Tables: 3, Equations: 0, References: 61, Pages: 10, Words: 0
                Funding
                Funded by: National Natural Science Foundation of China 10.13039/501100001809
                Categories
                Microbiology
                Original Research

                Microbiology & Virology
                termitomyces,fruiting,bacteria,fungus,cultivation,termite
                Microbiology & Virology
                termitomyces, fruiting, bacteria, fungus, cultivation, termite

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