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      Expression of a symbiosis-specific gene in Symbiodinium type A1 associated with coral, nudibranch and giant clam larvae

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          Abstract

          Symbiodinium are responsible for the majority of primary production in coral reefs and found in a mutualistic symbiosis with multiple animal phyla. However, little is known about the molecular signals involved in the establishment of this symbiosis and whether it initiates during host larval development. To address this question, we monitored the expression of a putative symbiosis-specific gene (H +-ATPase) in Symbiodinium A1 ex hospite and in association with larvae of a scleractinian coral ( Mussismilia hispida), a nudibranch ( Berghia stephanieae) and a giant clam ( Tridacna crocea). We acquired broodstock for each host, induced spawning and cultured the larvae. Symbiodinium cells were offered and larval samples taken for each host during the first 72 h after symbiont addition. In addition, control samples including free-living Symbiodinium and broodstock tissue containing symbionts for each host were collected. RNA extraction and RT-PCR were performed and amplified products cloned and sequenced. Our results show that H +-ATPase was expressed in Symbiodinium associated with coral and giant clam larvae, but not with nudibranch larvae, which digested the symbionts. Broodstock tissue for coral and giant clam also expressed H +-ATPase, but not the nudibranch tissue sample. Our results of the expression of H +-ATPase as a marker gene suggest that symbiosis between Symbiodinium and M. hispida and T. crocea is established during host larval development. Conversely, in the case of B. stephanieae larvae, evidence does not support a mutualistic relationship. Our study supports the utilization of H +-ATPase expression as a marker for assessing Symbiodinium–invertebrate relationships with applications for the differentiation of symbiotic and non-symbiotic associations. At the same time, insights from a single marker gene approach are limited and future studies should direct the identification of additional symbiosis-specific genes, ideally from both symbiont and host.

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          Molecular Cloning : A Laboratory Manual

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            Systematic and Biogeographical Patterns in the Reproductive Biology of Scleractinian Corals

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              A first-generation microsatellite-based genetic linkage map of the Siberian jay (Perisoreus infaustus): insights into avian genome evolution

              Background Genomic resources for the majority of free-living vertebrates of ecological and evolutionary importance are scarce. Therefore, linkage maps with high-density genome coverage are needed for progress in genomics of wild species. The Siberian jay (Perisoreus infaustus; Corvidae) is a passerine bird which has been subject to lots of research in the areas of ecology and evolutionary biology. Knowledge of its genome structure and organization is required to advance our understanding of the genetic basis of ecologically important traits in this species, as well as to provide insights into avian genome evolution. Results We describe the first genetic linkage map of Siberian jay constructed using 117 microsatellites and a mapping pedigree of 349 animals representing five families from a natural population breeding in western Finland from the years 1975 to 2006. Markers were resolved into nine autosomal and a Z-chromosome-specific linkage group, 10 markers remaining unlinked. The best-position map with the most likely positions of all significantly linked loci had a total sex-average size of 862.8 cM, with an average interval distance of 9.69 cM. The female map covered 988.4 cM, whereas the male map covered only 774 cM. The Z-chromosome linkage group comprised six markers, three pseudoautosomal and three sex-specific loci, and spanned 10.6 cM in females and 48.9 cM in males. Eighty-one of the mapped loci could be ordered on a framework map with odds of >1000:1 covering a total size of 809.6 cM in females and 694.2 cM in males. Significant sex specific distortions towards reduced male recombination rates were revealed in the entire best-position map as well as within two autosomal linkage groups. Comparative mapping between Siberian jay and chicken anchored 22 homologous loci on 6 different linkage groups corresponding to chicken chromosomes Gga1, 2, 3, 4, 5, and Z. Quite a few cases of intra-chromosomal rearrangements within the autosomes and three cases of inter-chromosomal rearrangement between the Siberian jay autosomal linkage groups (LG1, LG2 and LG3) and the chicken sex chromosome GgaZ were observed, suggesting a conserved synteny, but changes in marker order, within autosomes during about 100 million years of avian evolution. Conclusion The constructed linkage map represents a valuable resource for intraspecific genomics of Siberian jay, as well as for avian comparative genomic studies. Apart from providing novel insights into sex-specific recombination rates and patterns, the described maps – from a previously genomically uncharacterized superfamily (Corvidae) of passerine birds – provide new insights into avian genome evolution. In combination with high-resolution data on quantitative trait variability from the study population, they also provide a foundation for QTL-mapping studies.
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                Author and article information

                Journal
                R Soc Open Sci
                R Soc Open Sci
                RSOS
                royopensci
                Royal Society Open Science
                The Royal Society Publishing
                2054-5703
                May 2017
                24 May 2017
                24 May 2017
                : 4
                : 5
                : 170253
                Affiliations
                [1 ]Oceanographic Institute, University of São Paulo , Praça do Oceanográfico 191, 05508-120 São Paulo, SP, Brazil
                [2 ]Red Sea Research Center, Division of Biological and Environmental Science and Engineering, King Abdullah University of Science and Technology , 23955-6900 Thuwal, Saudi Arabia
                [3 ]Museu Nacional, Universidade Federal do Rio de Janeiro , Quinta da Boa Vista, s/n, 20940-040 Rio de Janeiro, RJ, Brazil
                [4 ]Instituto Coral Vivo , Rua dos Coqueiros, 87-45807-000 Santa Cruz Cabrália, BA, Brazil
                [5 ]Núcleo em Ecologia e Desenvolvimento Socioambiental de Macaé, Universidade Federal do Rio de Janeiro , Av São José do Barreto, 764-27965-045 Macaé, RJ, Brazil
                Author notes
                Author for correspondence: M. Mies e-mail: miguel.mies@ 123456usp.br
                Author information
                http://orcid.org/0000-0001-8925-7037
                Article
                rsos170253
                10.1098/rsos.170253
                5451836
                7e38d3ef-bdba-4d33-8388-fd34e27d9fc9
                © 2017 The Authors.

                Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/, which permits unrestricted use, provided the original author and source are credited.

                History
                : 22 March 2017
                : 27 April 2017
                Funding
                Funded by: Petrobras and Arraial d'Ajuda Eco Parque;
                Award ID: 302526/2012-9 and 2010/20350-8
                Categories
                1001
                60
                129
                69
                Biology (Whole Organism)
                Research Article
                Custom metadata
                May, 2017

                zooxanthellae,tridacna,scleractinia,sea slug,larval ecology,atpase

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