Mathis Hjort Hjelmsø:
ORCID: http://orcid.org/0000-0001-9716-624X
Role: ConceptualizationRole: Data curationRole: Formal analysisRole: InvestigationRole:
MethodologyRole: Project administrationRole: VisualizationRole: Writing – original
draftRole: Writing – review & editing
Sarah Mollerup: Role: ConceptualizationRole: Data curationRole: Formal analysisRole: InvestigationRole:
MethodologyRole: SoftwareRole: VisualizationRole: Writing – review & editing
Randi Holm Jensen: Role: ConceptualizationRole: InvestigationRole: MethodologyRole: Writing – review
& editing
Carlotta Pietroni: Role: ConceptualizationRole: InvestigationRole: MethodologyRole: Writing – review
& editing
Oksana Lukjancenko: Role: Data curationRole: Formal analysisRole: InvestigationRole: MethodologyRole:
SoftwareRole: VisualizationRole: Writing – review & editing
Anna Charlotte Schultz: Role: ConceptualizationRole: Funding acquisitionRole: Project administrationRole:
SupervisionRole: Writing – review & editing
Frank M. Aarestrup: Role: ConceptualizationRole: Funding acquisitionRole: Project administrationRole:
SupervisionRole: Writing – review & editing
Anders Johannes Hansen: Role: ConceptualizationRole: Funding acquisitionRole: Project administrationRole:
ResourcesRole: SupervisionRole: VisualizationRole: Writing – review & editing
Ulrich Melcher: Role: Editor
Journal ID (nlm-ta): PLoS One
Journal ID (iso-abbrev): PLoS ONE
Journal ID (publisher-id): plos
Journal ID (pmc): plosone
Title:
PLoS ONE
Publisher:
Public Library of Science
(San Francisco, CA USA
)
ISSN
(Electronic):
1932-6203
Publication date
(Electronic):
14
January
2019
Publication date Collection: 2019
Volume: 14
Issue: 1
Electronic Location Identifier: e0210368
Affiliations
[1
]
Research Group for Genomic Epidemiology, Technical University of Denmark, Kongens
Lyngby, Denmark
[2
]
Centre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen,
Copenhagen, Denmark
[3
]
Division of Microbiology and Production, The National Food Institute, Technical University
of Denmark, Kongens Lyngby, Denmark
Oklahoma State University, UNITED STATES
Author notes
Competing Interests: The authors have declared that no competing interests exist.
Author information
Article
Publisher ID:
PONE-D-18-25424
DOI: 10.1371/journal.pone.0210368
PMC ID: 6331095
PubMed ID: 30640944
SO-VID: 7ff8b19b-7fd3-46dc-aee2-3c292dab0b0f
Copyright © © 2019 Hjelmsø et al
License:
This is an open access article distributed under the terms of the
Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided
the original author and source are credited.
This study has received funding from the Innovation Fund Denmark,
https://innovationsfonden.dk/en, (The GenomeDenmark platform, grant no. 019-2011-2) (AHJ) and the European Union’s
Horizon 2020 research and innovation programme,
https://ec.europa.eu/programmes/horizon2020/en/, under grant agreement no 643476 (COMPARE) (FMA), and The Villum Foundation,
https://veluxfoundations.dk/en, (VKR023052) (FMA). The funders had no role in study design, data collection and
analysis, decision to publish, or preparation of the manuscript.
Subject:
Research Article
Subject:
Biology and Life Sciences
Subject:
Microbiology
Subject:
Medical Microbiology
Subject:
Microbial Pathogens
Subject:
Viral Pathogens
Subject:
Medicine and Health Sciences
Subject:
Pathology and Laboratory Medicine
Subject:
Pathogens
Subject:
Microbial Pathogens
Subject:
Viral Pathogens
Subject:
Biology and Life Sciences
Subject:
Organisms
Subject:
Viruses
Subject:
Viral Pathogens
Subject:
Biology and Life Sciences
Subject:
Genetics
Subject:
Genomics
Subject:
Metagenomics
Subject:
Medicine and Health Sciences
Subject:
Epidemiology
Subject:
Disease Surveillance
Subject:
Infectious Disease Surveillance
Subject:
Medicine and Health Sciences
Subject:
Infectious Diseases
Subject:
Infectious Disease Control
Subject:
Infectious Disease Surveillance
Subject:
People and Places
Subject:
Geographical Locations
Subject:
Asia
Subject:
Biology and life sciences
Subject:
Organisms
Subject:
Viruses
Subject:
RNA viruses
Subject:
Filoviruses
Subject:
Ebola Virus
Subject:
Biology and Life Sciences
Subject:
Microbiology
Subject:
Medical Microbiology
Subject:
Microbial Pathogens
Subject:
Viral Pathogens
Subject:
Hemorrhagic Fever Viruses
Subject:
Ebola Virus
Subject:
Medicine and Health Sciences
Subject:
Pathology and Laboratory Medicine
Subject:
Pathogens
Subject:
Microbial Pathogens
Subject:
Viral Pathogens
Subject:
Hemorrhagic Fever Viruses
Subject:
Ebola Virus
Subject:
Biology and Life Sciences
Subject:
Organisms
Subject:
Viruses
Subject:
Viral Pathogens
Subject:
Hemorrhagic Fever Viruses
Subject:
Ebola Virus
Subject:
Biology and Life Sciences
Subject:
Organisms
Subject:
Viruses
Subject:
Hemorrhagic Fever Viruses
Subject:
Ebola Virus
Subject:
Research and Analysis Methods
Subject:
Database and Informatics Methods
Subject:
Biological Databases
Subject:
Sequence Databases
Subject:
Research and Analysis Methods
Subject:
Database and Informatics Methods
Subject:
Bioinformatics
Subject:
Sequence Analysis
Subject:
Sequence Databases
Subject:
Engineering and Technology
Subject:
Environmental Engineering
Subject:
Sewage
Subject:
Medicine and Health Sciences
Subject:
Public and Occupational Health