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      Machine Learning-Based CT Radiomics Method for Identifying the Stage of Wilms Tumor in Children

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          Abstract

          Purpose

          To develop and validate a machine learning-based CT radiomics method for preoperatively predicting the stages (stage I and non-stage I) of Wilms tumor (WT) in pediatric patients.

          Methods

          A total of 118 patients with WT, who underwent contrast-enhanced computed tomography (CT) scans in our center between 2014 and 2021, were studied retrospectively and divided into two groups: stage I and non-stage I disease. Patients were randomly divided into training cohorts ( n = 94) and test cohorts ( n = 24). A total of 1,781 radiomic features from seven feature classes were extracted from preoperative portal venous–phase images of abdominal CT. Synthetic Minority Over-Sampling Technique (SMOTE) was used to handle imbalanced datasets, followed by a t-test and Least Absolute Shrinkage and Selection Operator (LASSO) regularization for feature selection. Support Vector Machine (SVM) was deployed using the selected informative features to develop the predicting model. The performance of the model was evaluated according to its accuracy, sensitivity, and specificity. The receiver operating characteristic curve (ROC) and the area under the ROC curve (AUC) was also arranged to assess the model performance.

          Results

          The SVM model was fitted with 15 radiomic features obtained by t-test and LASSO concerning WT staging in the training dataset and demonstrated favorable performance in the testing dataset. Cross-validated AUC on the training dataset was 0.79 with a 95 percent confidence interval (CI) of 0.773–0.815 and a coefficient of variation of 3.76%, while AUC on the test dataset was 0.81, and accuracy, sensitivity, and specificity were 0.79, 0.87, and 0.69, respectively.

          Conclusions

          The machine learning model of SVM based on radiomic features extracted from CT images accurately predicted WT stage I and non-stage I disease in pediatric patients preoperatively, which provided a rapid and non-invasive way for investigation of WT stages.

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          Most cited references25

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          Computational Radiomics System to Decode the Radiographic Phenotype

          Radiomics aims to quantify phenotypic characteristics on medical imaging through the use of automated algorithms. Radiomic artificial intelligence (AI) technology, either based on engineered hard-coded algorithms or deep learning methods, can be used to develop non-invasive imaging-based biomarkers. However, lack of standardized algorithm definitions and image processing severely hampers reproducibility and comparability of results. To address this issue, we developed PyRadiomics , a flexible open-source platform capable of extracting a large panel of engineered features from medical images. PyRadiomics is implemented in Python and can be used standalone or using 3D-Slicer. Here, we discuss the workflow and architecture of PyRadiomics and demonstrate its application in characterizing lung-lesions. Source code, documentation, and examples are publicly available at www.radiomics.io . With this platform, we aim to establish a reference standard for radiomic analyses, provide a tested and maintained resource, and to grow the community of radiomic developers addressing critical needs in cancer research.
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            Radiomics: extracting more information from medical images using advanced feature analysis.

            Solid cancers are spatially and temporally heterogeneous. This limits the use of invasive biopsy based molecular assays but gives huge potential for medical imaging, which has the ability to capture intra-tumoural heterogeneity in a non-invasive way. During the past decades, medical imaging innovations with new hardware, new imaging agents and standardised protocols, allows the field to move towards quantitative imaging. Therefore, also the development of automated and reproducible analysis methodologies to extract more information from image-based features is a requirement. Radiomics--the high-throughput extraction of large amounts of image features from radiographic images--addresses this problem and is one of the approaches that hold great promises but need further validation in multi-centric settings and in the laboratory. Copyright © 2011 Elsevier Ltd. All rights reserved.
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              Development and Validation of a Radiomics Nomogram for Preoperative Prediction of Lymph Node Metastasis in Colorectal Cancer.

              To develop and validate a radiomics nomogram for preoperative prediction of lymph node (LN) metastasis in patients with colorectal cancer (CRC).
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                Author and article information

                Contributors
                Journal
                Front Pediatr
                Front Pediatr
                Front. Pediatr.
                Frontiers in Pediatrics
                Frontiers Media S.A.
                2296-2360
                23 May 2022
                2022
                : 10
                : 873035
                Affiliations
                [1] 1The Children's Hospital, Zhejiang University School of Medicine, National Clinical Research Center for Child Health , Hangzhou, China
                [2] 2Department of Neurology, Warren Alpert Medical School of Brown University , Providence, RI, United States
                [3] 3Department of Biomedical Engineering, Key Laboratory for Biomedical Engineering of Ministry of Education, School of Biomedical Engineering and Instrument Science, Zhejiang University , Hangzhou, China
                Author notes

                Edited by: Kenneth K. Y. Wong, The University of Hong Kong, Hong Kong SAR, China

                Reviewed by: Kin Fen Kevin Fung, Hospital Authority, Hong Kong SAR, China; Paul D. Losty, University of Liverpool, United Kingdom

                *Correspondence: Qiang Shu shuqiang@ 123456zju.edu.cn

                This article was submitted to Pediatric Surgery, a section of the journal Frontiers in Pediatrics

                Article
                10.3389/fped.2022.873035
                9168275
                35676904
                84390065-06ac-413b-835c-77eb8e03af31
                Copyright © 2022 Ma, Shu, Jia, Zhou, Liu, Liang, Ding, He and Shu.

                This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

                History
                : 10 February 2022
                : 14 April 2022
                Page count
                Figures: 5, Tables: 2, Equations: 0, References: 25, Pages: 9, Words: 4325
                Funding
                Funded by: Medical Science and Technology Project of Zhejiang Province, doi 10.13039/501100017594;
                Categories
                Pediatrics
                Original Research

                wilms tumor,clinical staging,ct,radiomics,machine learning
                wilms tumor, clinical staging, ct, radiomics, machine learning

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