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      Spatial epidemiology and adaptive targeted sampling to manage the Chagas disease vector Triatoma dimidiata

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          Abstract

          Widespread application of insecticide remains the primary form of control for Chagas disease in Central America, despite only temporarily reducing domestic levels of the endemic vector Triatoma dimidiata and having little long-term impact. Recently, an approach emphasizing community feedback and housing improvements has been shown to yield lasting results. However, the additional resources and personnel required by such an intervention likely hinders its widespread adoption. One solution to this problem would be to target only a subset of houses in a community while still eliminating enough infestations to interrupt disease transfer. Here we develop a sequential sampling framework that adapts to information specific to a community as more houses are visited, thereby allowing us to efficiently find homes with domiciliary vectors while minimizing sampling bias. The method fits Bayesian geostatistical models to make spatially informed predictions, while gradually transitioning from prioritizing houses based on prediction uncertainty to targeting houses with a high risk of infestation. A key feature of the method is the use of a single exploration parameter, α, to control the rate of transition between these two design targets. In a simulation study using empirical data from five villages in southeastern Guatemala, we test our method using a range of values for α, and find it can consistently select fewer homes than random sampling, while still bringing the village infestation rate below a given threshold. We further find that when additional socioeconomic information is available, much larger savings are possible, but that meeting the target infestation rate is less consistent, particularly among the less exploratory strategies. Our results suggest new options for implementing long-term T. dimidiata control.

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          Effective public health interventions for the control and elimination of neglected tropical diseases require an efficient use of resources while still causing long-term disease reduction at the community level. To use resources to best effect, areas most in need of control efforts must be identified. However, strategies for correctly identifying these areas are rarely known due to the complex environmental, biological, and cultural factors shaping disease spread. In turn, incorrect prioritization of control targets can cause the intervention to have no lasting effect. We address this tradeoff between efficiency and efficacy by adapting control priorities throughout an intervention, targeting areas of high uncertainty during the initial stages while shifting to areas of greatest risk at later stages. In the context of controlling Triatoma dimidiata, the primary vector of Chagas disease in several countries in Latin America, our methods provide a means of targeting only a subset of homes for insecticide and housing improvements, while still reducing a village’s overall infestation rate below the critical threshold.

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          Approximate Bayesian inference for latent Gaussian models by using integrated nested Laplace approximations

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            Model-based geostatistics

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              Bayesian Spatial Modelling withR-INLA

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                Author and article information

                Contributors
                Role: ConceptualizationRole: Data curationRole: Formal analysisRole: InvestigationRole: MethodologyRole: Project administrationRole: SoftwareRole: ValidationRole: VisualizationRole: Writing – original draftRole: Writing – review & editing
                Role: ConceptualizationRole: MethodologyRole: SupervisionRole: Writing – original draftRole: Writing – review & editing
                Role: Writing – review & editing
                Role: ConceptualizationRole: Data curationRole: Funding acquisitionRole: InvestigationRole: ResourcesRole: Writing – review & editing
                Role: ConceptualizationRole: Funding acquisitionRole: MethodologyRole: Project administrationRole: ResourcesRole: SupervisionRole: Writing – original draftRole: Writing – review & editing
                Role: ConceptualizationRole: Funding acquisitionRole: Project administrationRole: ResourcesRole: SupervisionRole: Writing – original draftRole: Writing – review & editing
                Role: Editor
                Journal
                PLoS Negl Trop Dis
                PLoS Negl Trop Dis
                plos
                PLoS Neglected Tropical Diseases
                Public Library of Science (San Francisco, CA USA )
                1935-2727
                1935-2735
                June 2022
                2 June 2022
                : 16
                : 6
                : e0010436
                Affiliations
                [1 ] Vermont Complex Systems Center, University of Vermont, Burlington, Vermont, United States of America
                [2 ] Department of Computer Science, University of Vermont, Burlington, Vermont, United States of America
                [3 ] Department of Mathematics & Statistics, University of Vermont, Burlington, Vermont, United States of America
                [4 ] Laboratorio de Entomología Aplicada y Parasitología, Universidad de San Carlos de Guatemala, Ciudad de Guatemala, Guatemala
                [5 ] Department of Biology, University of Vermont, Burlington, Vermont, United States of America
                Fundacao Oswaldo Cruz, BRAZIL
                Author notes

                The authors have declared that no competing interests exist.

                Author information
                https://orcid.org/0000-0002-5666-1161
                https://orcid.org/0000-0002-0008-3673
                Article
                PNTD-D-21-01764
                10.1371/journal.pntd.0010436
                9162375
                35653307
                8af7bd4b-6901-4d08-95c4-438485b5e01b
                © 2022 Case et al

                This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

                History
                : 16 December 2021
                : 20 April 2022
                Page count
                Figures: 3, Tables: 2, Pages: 18
                Funding
                Funded by: funder-id http://dx.doi.org/10.13039/100000057, National Institute of General Medical Sciences;
                Award ID: 1P20 GM125498-01
                Award Recipient :
                Funded by: funder-id http://dx.doi.org/10.13039/100000057, National Institute of General Medical Sciences;
                Award ID: 1P20 GM125498-01
                Award Recipient :
                Funded by: funder-id http://dx.doi.org/10.13039/100000057, National Institute of General Medical Sciences;
                Award ID: 1P20 GM125498-01
                Award Recipient :
                Funded by: funder-id http://dx.doi.org/10.13039/100000001, National Science Foundation;
                Award ID: DGE-1735316
                Award Recipient :
                Funded by: funder-id http://dx.doi.org/10.13039/100000001, National Science Foundation;
                Award ID: EPS-2019470
                Award Recipient :
                Funded by: International Development Research Center of Canada
                Award ID: 106531
                Award Recipient :
                BC, LHD and JGY acknowledge support from the National Institutes of Health 1P20 GM125498-01 Centers of Biomedical Research Excellence Award. BC is also supported as a Fellow of the National Science Foundation under NRT award DGE-1735316, and LHD by the National Science Foundation award EPS-2019470. The field data used in this work was supported by the International Development Research center of Canada (IDRC subsidy no. 106531) awarded to CM. The funders had no role in study design, data analysis, decision to publish, or preparation of the manuscript.
                Categories
                Research Article
                Medicine and Health Sciences
                Epidemiology
                Medical Risk Factors
                Biology and Life Sciences
                Agriculture
                Agrochemicals
                Insecticides
                Medicine and Health Sciences
                Medical Conditions
                Infectious Diseases
                Infectious Disease Control
                Medicine and Health Sciences
                Medical Conditions
                Tropical Diseases
                Neglected Tropical Diseases
                Chagas Disease
                Medicine and Health Sciences
                Medical Conditions
                Parasitic Diseases
                Protozoan Infections
                Chagas Disease
                Earth Sciences
                Geography
                Human Geography
                Housing
                Social Sciences
                Human Geography
                Housing
                Medicine and Health Sciences
                Medical Conditions
                Infectious Diseases
                Disease Vectors
                Insect Vectors
                Biology and Life Sciences
                Species Interactions
                Disease Vectors
                Insect Vectors
                Biology and Life Sciences
                Zoology
                Entomology
                Insects
                Biology and Life Sciences
                Organisms
                Eukaryota
                Animals
                Invertebrates
                Arthropoda
                Insects
                Biology and Life Sciences
                Zoology
                Animals
                Invertebrates
                Arthropoda
                Insects
                Medicine and Health Sciences
                Medical Conditions
                Infectious Diseases
                Disease Vectors
                Biology and Life Sciences
                Species Interactions
                Disease Vectors
                Custom metadata
                All methods used, as well as results and underlying data shown in our figures, are available at https://doi.org/10.5281/zenodo.6462160.

                Infectious disease & Microbiology
                Infectious disease & Microbiology

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