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      The Role of Soil Microorganisms in Plant Mineral Nutrition—Current Knowledge and Future Directions

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          Abstract

          In their natural environment, plants are part of a rich ecosystem including numerous and diverse microorganisms in the soil. It has been long recognized that some of these microbes, such as mycorrhizal fungi or nitrogen fixing symbiotic bacteria, play important roles in plant performance by improving mineral nutrition. However, the full range of microbes associated with plants and their potential to replace synthetic agricultural inputs has only recently started to be uncovered. In the last few years, a great progress has been made in the knowledge on composition of rhizospheric microbiomes and their dynamics. There is clear evidence that plants shape microbiome structures, most probably by root exudates, and also that bacteria have developed various adaptations to thrive in the rhizospheric niche. The mechanisms of these interactions and the processes driving the alterations in microbiomes are, however, largely unknown. In this review, we focus on the interaction of plants and root associated bacteria enhancing plant mineral nutrition, summarizing the current knowledge in several research fields that can converge to improve our understanding of the molecular mechanisms underpinning this phenomenon.

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          Most cited references195

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          The plant immune system.

          Many plant-associated microbes are pathogens that impair plant growth and reproduction. Plants respond to infection using a two-branched innate immune system. The first branch recognizes and responds to molecules common to many classes of microbes, including non-pathogens. The second responds to pathogen virulence factors, either directly or through their effects on host targets. These plant immune systems, and the pathogen molecules to which they respond, provide extraordinary insights into molecular recognition, cell biology and evolution across biological kingdoms. A detailed understanding of plant immune function will underpin crop improvement for food, fibre and biofuels production.
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            Planetary boundaries: Guiding human development on a changing planet

            The planetary boundaries framework defines a safe operating space for humanity based on the intrinsic biophysical processes that regulate the stability of the Earth system. Here, we revise and update the planetary boundary framework, with a focus on the underpinning biophysical science, based on targeted input from expert research communities and on more general scientific advances over the past 5 years. Several of the boundaries now have a two-tier approach, reflecting the importance of cross-scale interactions and the regional-level heterogeneity of the processes that underpin the boundaries. Two core boundaries—climate change and biosphere integrity—have been identified, each of which has the potential on its own to drive the Earth system into a new state should they be substantially and persistently transgressed.
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              Solutions for a cultivated planet.

              Increasing population and consumption are placing unprecedented demands on agriculture and natural resources. Today, approximately a billion people are chronically malnourished while our agricultural systems are concurrently degrading land, water, biodiversity and climate on a global scale. To meet the world's future food security and sustainability needs, food production must grow substantially while, at the same time, agriculture's environmental footprint must shrink dramatically. Here we analyse solutions to this dilemma, showing that tremendous progress could be made by halting agricultural expansion, closing 'yield gaps' on underperforming lands, increasing cropping efficiency, shifting diets and reducing waste. Together, these strategies could double food production while greatly reducing the environmental impacts of agriculture.
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                Author and article information

                Contributors
                Journal
                Front Plant Sci
                Front Plant Sci
                Front. Plant Sci.
                Frontiers in Plant Science
                Frontiers Media S.A.
                1664-462X
                19 September 2017
                2017
                : 8
                : 1617
                Affiliations
                Botanical Institute, Cluster of Excellence on Plant Sciences (CEPLAS), University of Cologne Cologne, Germany
                Author notes

                Edited by: Girdhar Kumar Pandey, University of Delhi, India

                Reviewed by: Raffaella Balestrini, Consiglio Nazionale delle Ricerche (CNR), Italy; Ingo Dreyer, Universidad de Talca, Chile

                *Correspondence: Stanislav Kopriva, skopriva@ 123456uni-koeln.de

                Present address: Manuela Peukert, Department of Safety and Quality of Meat, Federal Research Institute of Nutrition and Food, Max Rubner-Institut (MRI), Kulmbach, Germany

                This article was submitted to Plant Physiology, a section of the journal Frontiers in Plant Science

                Article
                10.3389/fpls.2017.01617
                5610682
                28974956
                8b12a587-1cb0-4868-b458-23f916ac9d72
                Copyright © 2017 Jacoby, Peukert, Succurro, Koprivova and Kopriva.

                This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

                History
                : 02 July 2017
                : 04 September 2017
                Page count
                Figures: 5, Tables: 1, Equations: 0, References: 189, Pages: 19, Words: 0
                Funding
                Funded by: Deutsche Forschungsgemeinschaft 10.13039/501100001659
                Award ID: EXC 1028
                Funded by: H2020 Marie Skłodowska-Curie Actions 10.13039/100010665
                Award ID: 705808
                Categories
                Plant Science
                Review

                Plant science & Botany
                plant–microbe interactions,plant nutrition,microbiome,root exudates,natural variation,mathematical modeling

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