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      Functional analysis of Wolbachia Cid effectors unravels cooperative interactions to target host chromatin during replication

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          Abstract

          Wolbachia are common bacteria among terrestrial arthropods. These endosymbionts transmitted through the female germline manipulate their host reproduction through several mechanisms whose most prevalent form called Cytoplasmic Incompatibility -CI- is a conditional sterility syndrome eventually favoring the infected progeny. Upon fertilization, the sperm derived from an infected male is only compatible with an egg harboring a compatible Wolbachia strain, this sperm leading otherwise to embryonic death. The Wolbachia Cif factors CidA and CidB responsible for CI and its neutralization function as a Toxin-Antitoxin system in the mosquito host Culex pipiens. However, the mechanism of CidB toxicity and its neutralization by the CidA antitoxin remain unexplored. Using transfected insect cell lines to perform a structure-function analysis of these effectors, we show that both CidA and CidB are chromatin interactors and CidA anchors CidB to the chromatin in a cell-cycle dependent-manner. In absence of CidA, the CidB toxin localizes to its own chromatin microenvironment and acts by preventing S-phase completion, independently of its deubiquitylase -DUB- domain. Experiments with transgenic Drosophila show that CidB DUB domain is required together with CidA during spermatogenesis to stabilize the CidA-CidB complex. Our study defines CidB functional regions and paves the way to elucidate the mechanism of its toxicity.

          Author summary

          Wolbachia are common Rickettsiales among terrestrial arthropods species and are transmitted vertically through the female germline. These endosymbionts can cause Cytoplasmic Incompatibility -CI-, which is their major form of reproductive manipulation in insects. This sterility syndrome favors the spread of Wolbachia in the host population because eggs fertilized by a sperm from an infected male only develop properly when the female is infected with the same or a compatible Wolbachia strain. In contrast, if the sperm derived from an infected male fertilizes a non-infected egg or an egg harboring a non-compatible Wolbachia strain, CI leads to embryonic death. Culex pipiens mosquitos are infected with Wolbachia wPip endosymbionts. wPip Cid effectors causing CI function as a Toxin (CidB) /Antixotin (CidA) system. CidB is loaded without CidA in the maturing sperm to cause CI, while CidA neutralizes CidB during spermatogenesis up to the histone-to-protamine transition and in the compatible Wolbachia-infected egg. We explored through mutagenesis approaches how CidB causes cellular toxicity and how it is prevented by CidA. This allowed us to identify CidB and CidA functional domains including chromatin binding domains found in both effectors. CidA transports, stabilizes and neutralizes CidB on the chromatin, preventing the toxin to otherwise block S-phase completion.

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          Wolbachia: master manipulators of invertebrate biology.

          Wolbachia are common intracellular bacteria that are found in arthropods and nematodes. These alphaproteobacteria endosymbionts are transmitted vertically through host eggs and alter host biology in diverse ways, including the induction of reproductive manipulations, such as feminization, parthenogenesis, male killing and sperm-egg incompatibility. They can also move horizontally across species boundaries, resulting in a widespread and global distribution in diverse invertebrate hosts. Here, we review the basic biology of Wolbachia, with emphasis on recent advances in our understanding of these fascinating endosymbionts.
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            An optimized transgenesis system for Drosophila using germ-line-specific phiC31 integrases.

            Germ-line transformation via transposable elements is a powerful tool to study gene function in Drosophila melanogaster. However, some inherent characteristics of transposon-mediated transgenesis limit its use for transgene analysis. Here, we circumvent these limitations by optimizing a phiC31-based integration system. We generated a collection of lines with precisely mapped attP sites that allow the insertion of transgenes into many different predetermined intergenic locations throughout the fly genome. By using regulatory elements of the nanos and vasa genes, we established endogenous sources of the phiC31 integrase, eliminating the difficulties of coinjecting integrase mRNA and raising the transformation efficiency. Moreover, to discriminate between specific and rare nonspecific integration events, a white gene-based reconstitution system was generated that enables visual selection for precise attP targeting. Finally, we demonstrate that our chromosomal attP sites can be modified in situ, extending their scope while retaining their properties as landing sites. The efficiency, ease-of-use, and versatility obtained here with the phiC31-based integration system represents an important advance in transgenesis and opens up the possibility of systematic, high-throughput screening of large cDNA sets and regulatory elements.
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              Prophage WO Genes Recapitulate and Enhance Wolbachia-induced Cytoplasmic Incompatibility

              The genus Wolbachia is an archetype of maternally inherited intracellular bacteria that infect the germline of numerous invertebrate species worldwide. They can selfishly alter arthropod sex ratios and reproductive strategies to increase the proportion of the infected matriline in the population. The most common reproductive manipulation is cytoplasmic incompatibility (CI), which results in embryonic lethality in crosses between infected males and uninfected females. Females infected with the same Wolbachia strain rescue this lethality. Despite more than 40 years of research 1 and relevance to symbiont-induced speciation 2,3 , as well as control of arbovirus vectors 4,5,6 and agricultural pests 7 , the bacterial genes underlying CI remain unknown. Here, we use comparative and transgenic approaches to demonstrate that two differentially transcribed, codiverging genes in the eukaryotic association module of prophage WO 8 from Wolbachia strain wMel recapitulate and enhance CI. Dual expression in transgenic, uninfected males of Drosophila melanogaster crossed to uninfected females causes embryonic lethality. Each gene additively augments embryonic lethality in infected males crossed to uninfected females. Lethality associates with embryonic defects that parallel those of wild type CI and is notably rescued by wMel-infected embryos in all cases. The discovery of cytoplasmic incompatibility factor genes cifA and cifB pioneers genetic studies of prophage WO-induced reproductive manipulations and informs Wolbachia’s ongoing utility to control dengue and Zika transmission to humans.
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                Author and article information

                Contributors
                Role: ConceptualizationRole: Data curationRole: Formal analysisRole: MethodologyRole: ResourcesRole: Writing – original draftRole: Writing – review & editing
                Role: ConceptualizationRole: Formal analysisRole: InvestigationRole: MethodologyRole: ResourcesRole: VisualizationRole: Writing – review & editing
                Role: Funding acquisitionRole: Resources
                Role: Data curationRole: Formal analysisRole: Funding acquisitionRole: InvestigationRole: MethodologyRole: ResourcesRole: SupervisionRole: Writing – review & editing
                Role: ConceptualizationRole: Data curationRole: Formal analysisRole: Funding acquisitionRole: InvestigationRole: MethodologyRole: Project administrationRole: SupervisionRole: ValidationRole: VisualizationRole: Writing – original draftRole: Writing – review & editing
                Role: Editor
                Journal
                PLoS Pathog
                PLoS Pathog
                plos
                PLOS Pathogens
                Public Library of Science (San Francisco, CA USA )
                1553-7366
                1553-7374
                16 March 2023
                March 2023
                : 19
                : 3
                : e1011211
                Affiliations
                [1 ] CRBM, Université de Montpellier, CNRS, Montpellier, France
                [2 ] LBMC, Ecole Normale Supérieure de Lyon, CNRS UMR5239, Université Claude Bernard Lyon 1, Lyon, France
                [3 ] ISEM, Université de Montpellier, CNRS, IRD, Montpellier, France
                University of Cambridge, UNITED KINGDOM
                Author notes

                The authors have declared that no competing interests exist.

                Author information
                https://orcid.org/0000-0002-8740-7879
                Article
                PPATHOGENS-D-22-01532
                10.1371/journal.ppat.1011211
                10047532
                36928089
                98af90a2-7fa4-4948-ab3d-1019077729b5
                © 2023 Terretaz et al

                This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

                History
                : 1 September 2022
                : 16 February 2023
                Page count
                Figures: 7, Tables: 0, Pages: 23
                Funding
                Funded by: Agence Nationale de la Recherche
                Award ID: ANR-16-IDEX-0006
                Award Recipient :
                Funded by: Agence Nationale de la Recherche
                Award ID: ANR-10-INBS-04
                Award Recipient :
                Funded by: funder-id http://dx.doi.org/10.13039/501100012616, Fondation Schlumberger pour l’Education et la Recherche;
                Award ID: FSER202002011118
                Award Recipient :
                This work was supported by several fundings from the French Agence Nationale de la Recherche ( https://anr.fr/en/) «Investments for the future»: ANR-16-IDEX-0006 -FL and MW-, ANR-10-INBS-04 -BL, BH-; and a grant from the Fondation Schlumberger pour l’Education et la Recherche ( http://www.cerclefser.org/en/) FSER202002011118 to FL. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
                Categories
                Research Article
                Biology and Life Sciences
                Cell Biology
                Chromosome Biology
                Chromatin
                Biology and Life Sciences
                Genetics
                Epigenetics
                Chromatin
                Biology and Life Sciences
                Genetics
                Gene Expression
                Chromatin
                Research and Analysis Methods
                Animal Studies
                Experimental Organism Systems
                Model Organisms
                Drosophila Melanogaster
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                Drosophila Melanogaster
                Research and Analysis Methods
                Animal Studies
                Experimental Organism Systems
                Animal Models
                Drosophila Melanogaster
                Biology and Life Sciences
                Zoology
                Entomology
                Insects
                Drosophila
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                Eukaryota
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                Arthropoda
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                Zoology
                Animals
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                Arthropoda
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                Biology and Life Sciences
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                Molecular Biology
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                Cell Biology
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                Medicine and Health Sciences
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                Biology and Life Sciences
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                Biology and Life Sciences
                Cell Biology
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                Cell Death
                Apoptosis
                Custom metadata
                vor-update-to-uncorrected-proof
                2023-03-28
                The authors confirm that all data underlying the findings are fully available without restriction. All relevant data are within the paper and its Supporting Information files.

                Infectious disease & Microbiology
                Infectious disease & Microbiology

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