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      Computation of adherence to medication and visualization of medication histories in R with AdhereR: Towards transparent and reproducible use of electronic healthcare data

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      1 , 2 , 3 , 4 , *
      PLoS ONE
      Public Library of Science

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          Abstract

          Adherence to medications is an important indicator of the quality of medication management and impacts on health outcomes and cost-effectiveness of healthcare delivery. Electronic healthcare data (EHD) are increasingly used to estimate adherence in research and clinical practice, yet standardization and transparency of data processing are still a concern. Comprehensive and flexible open-source algorithms can facilitate the development of high-quality, consistent, and reproducible evidence in this field. Some EHD-based clinical decision support systems (CDSS) include visualization of medication histories, but this is rarely integrated in adherence analyses and not easily accessible for data exploration or implementation in new clinical settings. We introduce AdhereR, a package for the widely used open-source statistical environment R, designed to support researchers in computing EHD-based adherence estimates and in visualizing individual medication histories and adherence patterns. AdhereR implements a set of functions that are consistent with current adherence guidelines, definitions and operationalizations. We illustrate the use of AdhereR with an example dataset of 2-year records of 100 patients and describe the various analysis choices possible and how they can be adapted to different health conditions and types of medications. The package is freely available for use and its implementation facilitates the integration of medication history visualizations in open-source CDSS platforms.

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          The assessment of refill compliance using pharmacy records: methods, validity, and applications.

          The refill records of computerized pharmacy systems are used increasingly as a source of compliance information. We reviewed the English-language literature to develop a typology of methods for assessing refill compliance (RC), to describe the epidemiology of compliance in obtaining medications, to identify studies that attempted to validate RC measures, to describe clinical features that predicted RC, and to describe the uses of RC measures in epidemiologic and health services research. In most of the 41 studies reviewed, patients obtained less medication than prescribed; gaps in treatment were common. Of the studies that assessed the validity of RC measures, most found significant associations between RC and other compliance measures, as well as measures of drug presence (e.g., serum drug levels) or physiologic drug effects. Refill compliance was generally not correlated with demographic characteristics of study populations, was higher among drugs with fewer daily doses, and was inconsistently associated with the total number of drugs prescribed. We conclude that, though some methodologic problems require further study, RC measures can be a useful source of compliance information in population-based studies when direct measurement of medication consumption is not feasible.
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            Comparing Adherence and Persistence Across 6 Chronic Medication Classes

            BACKGROUND: The National Quality Forum recently endorsed the proportion of days covered (PDC)—a measure of medication adherence—as an indicator of quality in drug therapy management. OBJECTIVES: To inform initial efforts to improve the quality of drug therapy management, we compared PDC and persistence among new users of 6 commonly used chronic medication categories. METHODS: A retrospective analysis of pharmacy claims in a database of more than 64 million members enrolled in 100 health plans assessed persistence and adherence to drug therapy in 6 chronic conditions. Patients were included in the analysis if they initiated a prescription drug of interest in any of 6 drug classes—prostaglandin analogs, statins, bisphosphonates,oral antidiabetics, angiotensin II receptor blockers (ARBs), and overactive bladder (OAB) medications—between January 1 and December 31, 2005.The first claim for a drug of interest during this period was considered a patient’s index date. Patients were required to have a minimum of 12months of continuous enrollment both preceding and following their index date. New users of a treatment were identified by excluding patients who filled a prescription for any drug in the same class during the previous 12months and were followed for a minimum of 12 months. Nonpersistence was defined as discontinuation of the therapy class following an allowed gap between refills—30-, 60-, and 90-day refill gaps were used. Adherence was defined as a continuous measure of the proportion of days covered (PDC) during the 12-month post-index period. Logistic regression analyses predicted (a) nonpersistence during the 12-month post-index period and (b) adherence (PDC) of at least 80%, with drug class as the predictor variable of interest, controlling for demographic variables, insurance and plan type, history of hospitalization, Charlson comorbidity score,copayment for index medication, and number of medications at index. RESULTS: A total of 167,907 patients were identified across 6 cohorts.Using the 60-day gap, 6-month persistence rates were prostagl and in analogs 47%, statins 56%, bisphosphonates 56%, oral antidiabetics 66%,ARBs 63%, and OAB medications 28%. After the first 90 days of therapy,relative persistence was stable across cohorts, and rates declined consistently from 6 months post-index to study end. Logistic regression models showed that oral antidiabetic users had a 59%, 36%, 37%, and 79% decreased risk of nonpersistence in a 12-month follow-up period compared with patients taking prostaglandin analogs, statins, bisphosphonates, orOAB medications, respectively. Risk of nonpersistence decreased with increasing age. Mean (SD) 12-month adherence rates were: prostagl and in analogs 37% (26%), statins 61% (33%), bisphosphonates 60% (34%), oral antidiabetics 72% (32%), ARBs 66% (32%), and OAB medications 35%(32%). Logistic regression indicated that oral antidiabetic use was a significantpredictor of adherence (PDC) of at least 80% compared with other therapy classes. Adjusted odds ratios for oral antidiabetics were 17.60(95% confidence interval [CI]=15.38-20.14) versus prostaglandin analogs,2.06 (95% CI=1.99-2.12) versus statins, 1.92 (95% CI=1.83-2.02) versus bisphosphonates, 1.29 (95% CI=1.24-1.34) versus ARBs, and 5.77 (95%CI=5.38-6.19) versus OAB medications.
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              Assessing medication adherence: options to consider.

              Adherence to chronic therapy is a key determinant of patient health outcomes in chronic disease. However, only about 50 % of patients adhere to chronic therapy. One of the challenges in promoting adherence is having an accurate understanding of adherence rates and the factors that contribute to non-adherence. There are many measures available to assess patient medication adherence.
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                Author and article information

                Contributors
                Role: Editor
                Journal
                PLoS One
                PLoS ONE
                plos
                plosone
                PLoS ONE
                Public Library of Science (San Francisco, CA USA )
                1932-6203
                26 April 2017
                2017
                : 12
                : 4
                : e0174426
                Affiliations
                [1 ]Amsterdam School of Communication Research ASCoR, University of Amsterdam, Amsterdam, the Netherlands
                [2 ]Health Services and Performance Research (HESPER EA 7425), University Claude Bernard Lyon 1, Lyon, France
                [3 ]Language and Genetics Department, Max Planck Institute for Psycholinguistics, Nijmegen, The Netherlands
                [4 ]Donders Institute for Brain, Cognition and Behavior, Radboud University, Nijmegen, The Netherlands
                Universite de Bretagne Occidentale, FRANCE
                Author notes

                Competing Interests: The authors have declared that no competing interests exist.

                • Conceptualization: ALD.

                • Data curation: DD.

                • Formal analysis: ALD DD.

                • Investigation: ALD DD.

                • Methodology: ALD DD.

                • Software: DD ALD.

                • Validation: ALD DD.

                • Visualization: DD.

                • Writing – original draft: ALD.

                • Writing – review & editing: ALD DD.

                Author information
                http://orcid.org/0000-0002-0704-6365
                Article
                PONE-D-16-48957
                10.1371/journal.pone.0174426
                5405929
                28445530
                9b3a361b-725a-4020-80e2-874aecb69981
                © 2017 Dima, Dediu

                This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

                History
                : 11 December 2016
                : 8 March 2017
                Page count
                Figures: 2, Tables: 5, Pages: 14
                Funding
                Funded by: funder-id http://dx.doi.org/10.13039/501100000780, European Commission;
                Award ID: 282593
                ALD has received funding from the European Community’s 7th Framework (FP7/2007-2013) under grant agreement n°282593 (ASTRO-LAB project) during the development of this tool.
                Categories
                Research Article
                Medicine and Health Sciences
                Pharmaceutics
                Drug Therapy
                Computer and Information Sciences
                Information Technology
                Data Processing
                Medicine and Health Sciences
                Computer and Information Sciences
                Computer Architecture
                Computer Hardware
                Computer and Information Sciences
                Data Visualization
                Biology and Life Sciences
                Taxonomy
                Computer and Information Sciences
                Data Management
                Taxonomy
                Computer and Information Sciences
                Computer Software
                Open Source Software
                Science Policy
                Open Science
                Open Source Software
                Research and Analysis Methods
                Research Assessment
                Reproducibility
                Custom metadata
                The AdhereR package is available on CRAN (The Comprehensive R Archive Network; https://cran.r-project.org/), and source code, data, and documentation are available on GitHub ( https://github.com/ddediu/AdhereR). Additionally, S1 File contains a supplementary R script that, when used in conjunction with the package, produces all analyses and figures included in the paper.

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