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      Current Challenges and New Opportunities for Gene-Environment Interaction Studies of Complex Diseases

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          Abstract

          Recently, many new approaches, study designs, and statistical and analytical methods have emerged for studying gene-environment interactions (G×Es) in large-scale studies of human populations. There are opportunities in this field, particularly with respect to the incorporation of -omics and next-generation sequencing data and continual improvement in measures of environmental exposures implicated in complex disease outcomes. In a workshop called “Current Challenges and New Opportunities for Gene-Environment Interaction Studies of Complex Diseases,” held October 17–18, 2014, by the National Institute of Environmental Health Sciences and the National Cancer Institute in conjunction with the annual American Society of Human Genetics meeting, participants explored new approaches and tools that have been developed in recent years for G×E discovery. This paper highlights current and critical issues and themes in G×E research that need additional consideration, including the improved data analytical methods, environmental exposure assessment, and incorporation of functional data and annotations.

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          Author and article information

          Journal
          Am J Epidemiol
          Am. J. Epidemiol
          aje
          American Journal of Epidemiology
          Oxford University Press
          0002-9262
          1476-6256
          01 October 2017
          15 July 2017
          01 October 2018
          : 186
          : 7
          : 753-761
          Author notes
          [* ]Correspondence to Dr. Leah E. Mechanic, Genomic Epidemiology Branch, Epidemiology and Genomics Research Program, Division of Cancer Control and Population Sciences, National Cancer Institute, 9609 Medical Center Drive, Room 4E104, MSC 9763, Bethesda, MD 20892 (e-mail: mechanil@ 123456mail.nih.gov ).
          Abbreviations: GWAS, genome-wide association study; G×E, gene-environment interaction.
          Article
          PMC5860428 PMC5860428 5860428 kwx227
          10.1093/aje/kwx227
          5860428
          28978193
          9ea497cf-98a0-484b-b6a0-a2e0e1f20e52
          Published by Oxford University Press on behalf of the Johns Hopkins Bloomberg School of Public Health 2017.

          This work is written by (a) US Government employee(s) and is in the public domain in the US.

          History
          : 07 November 2016
          : 14 March 2017
          : 16 March 2017
          Page count
          Pages: 9
          Funding
          Funded by: National Institutes of Health 10.13039/100000002
          Award ID: R01HG008150
          Award ID: R01MH101814
          Award ID: U01HG007436
          Award ID: U01HG009080
          Funded by: National Cancer Institute 10.13039/100000054
          Award ID: U19CA203654
          Award ID: U01CA196386
          Award ID: R01CA140561
          Award ID: R01CA201407
          Award ID: P01CA196569
          Award ID: P01CA196569
          Award ID: R01CA201407
          Award ID: R01CA189532
          Award ID: R01CA195789
          Award ID: P01CA53996
          Award ID: R21CA169535
          Award ID: R01CA179977
          Award ID: R01CA169122
          Award ID: R01CA169122
          Award ID: R01CA201358
          Funded by: National Heart, Lung, and Blood Institute 10.13039/100000050
          Award ID: R01HL116720
          Award ID: R21HL126032
          Funded by: National Human Genome Research Institute 10.13039/100000051
          Award ID: R21HG007687
          Funded by: National Institute of Environmental Health Sciences 10.13039/100000066
          Categories
          Special Article

          gene-environment interaction,environmental exposure,genome-wide association study

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