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      Microbial diversity and composition of the Preah Vihear temple in Cambodia by high-throughput sequencing based on genomic DNA and RNA

      , , , ,
      International Biodeterioration & Biodegradation
      Elsevier BV

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          Most cited references38

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          Is Open Access

          The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

          SILVA (from Latin silva, forest, http://www.arb-silva.de) is a comprehensive web resource for up to date, quality-controlled databases of aligned ribosomal RNA (rRNA) gene sequences from the Bacteria, Archaea and Eukaryota domains and supplementary online services. The referred database release 111 (July 2012) contains 3 194 778 small subunit and 288 717 large subunit rRNA gene sequences. Since the initial description of the project, substantial new features have been introduced, including advanced quality control procedures, an improved rRNA gene aligner, online tools for probe and primer evaluation and optimized browsing, searching and downloading on the website. Furthermore, the extensively curated SILVA taxonomy and the new non-redundant SILVA datasets provide an ideal reference for high-throughput classification of data from next-generation sequencing approaches.
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            QIIME allows analysis of high-throughput community sequencing data.

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              Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

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                Author and article information

                Journal
                International Biodeterioration & Biodegradation
                International Biodeterioration & Biodegradation
                Elsevier BV
                09648305
                April 2020
                April 2020
                : 149
                : 104936
                Article
                10.1016/j.ibiod.2020.104936
                9f035d47-b4f6-45d2-89c3-38c4b3bf143c
                © 2020

                https://www.elsevier.com/tdm/userlicense/1.0/

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