15
views
0
recommends
+1 Recommend
0 collections
    0
    shares
      • Record: found
      • Abstract: found
      • Article: found
      Is Open Access

      The Gut Microbiome and Individual-Specific Responses to Diet

      review-article

      Read this article at

      Bookmark
          There is no author summary for this article yet. Authors can add summaries to their articles on ScienceOpen to make them more accessible to a non-specialist audience.

          Abstract

          Nutritional content and timing are increasingly appreciated to constitute important human variables collectively impacting all aspects of human physiology and disease. However, person-specific mechanisms driving nutritional impacts on the human host remain incompletely understood, while current dietary recommendations remain empirical and nonpersonalized. Precision nutrition aims to harness individualized bodies of data, including the human gut microbiome, in predicting person-specific physiological responses (such as glycemic responses) to food.

          ABSTRACT

          Nutritional content and timing are increasingly appreciated to constitute important human variables collectively impacting all aspects of human physiology and disease. However, person-specific mechanisms driving nutritional impacts on the human host remain incompletely understood, while current dietary recommendations remain empirical and nonpersonalized. Precision nutrition aims to harness individualized bodies of data, including the human gut microbiome, in predicting person-specific physiological responses (such as glycemic responses) to food. With these advances notwithstanding, many unknowns remain, including the long-term efficacy of such interventions in delaying or reversing human metabolic disease, mechanisms driving these dietary effects, and the extent of the contribution of the gut microbiome to these processes. We summarize these conceptual advances, while highlighting challenges and means of addressing them in the next decade of study of precision medicine, toward generation of insights that may help to evolve precision nutrition as an effective future tool in a variety of “multifactorial” human disorders.

          Related collections

          Most cited references89

          • Record: found
          • Abstract: found
          • Article: not found

          Dietary Fiber-Induced Improvement in Glucose Metabolism Is Associated with Increased Abundance of Prevotella.

          The gut microbiota plays an important role in human health by interacting with host diet, but there is substantial inter-individual variation in the response to diet. Here we compared the gut microbiota composition of healthy subjects who exhibited improved glucose metabolism following 3-day consumption of barley kernel-based bread (BKB) with those who responded least to this dietary intervention. The Prevotella/Bacteroides ratio was higher in responders than non-responders after BKB. Metagenomic analysis showed that the gut microbiota of responders was enriched in Prevotella copri and had increased potential to ferment complex polysaccharides after BKB. Finally, germ-free mice transplanted with microbiota from responder human donors exhibited improved glucose metabolism and increased abundance of Prevotella and liver glycogen content compared with germ-free mice that received non-responder microbiota. Our findings indicate that Prevotella plays a role in the BKB-induced improvement in glucose metabolism observed in certain individuals, potentially by promoting increased glycogen storage.
            Bookmark
            • Record: found
            • Abstract: found
            • Article: not found

            How glycan metabolism shapes the human gut microbiota.

            Symbiotic microorganisms that reside in the human intestine are adept at foraging glycans and polysaccharides, including those in dietary plants (starch, hemicellulose and pectin), animal-derived cartilage and tissue (glycosaminoglycans and N-linked glycans), and host mucus (O-linked glycans). Fluctuations in the abundance of dietary and endogenous glycans, combined with the immense chemical variation among these molecules, create a dynamic and heterogeneous environment in which gut microorganisms proliferate. In this Review, we describe how glycans shape the composition of the gut microbiota over various periods of time, the mechanisms by which individual microorganisms degrade these glycans, and potential opportunities to intentionally influence this ecosystem for better health and nutrition.
              Bookmark
              • Record: found
              • Abstract: found
              • Article: found
              Is Open Access

              High Fat Diet-Induced Gut Microbiota Exacerbates Inflammation and Obesity in Mice via the TLR4 Signaling Pathway

              Background & Aims While it is widely accepted that obesity is associated with low-grade systemic inflammation, the molecular origin of the inflammation remains unknown. Here, we investigated the effect of endotoxin-induced inflammation via TLR4 signaling pathway at both systemic and intestinal levels in response to a high-fat diet. Methods C57BL/6J and TLR4-deficient C57BL/10ScNJ mice were maintained on a low-fat (10 kcal % fat) diet (LFD) or a high–fat (60 kcal % fat) diet (HFD) for 8 weeks. Results HFD induced macrophage infiltration and inflammation in the adipose tissue, as well as an increase in the circulating proinflammatory cytokines. HFD increased both plasma and fecal endotoxin levels and resulted in dysregulation of the gut microbiota by increasing the Firmicutes to Bacteriodetes ratio. HFD induced the growth of Enterobecteriaceae and the production of endotoxin in vitro. Furthermore, HFD induced colonic inflammation, including the increased expression of proinflammatory cytokines, the induction of Toll-like receptor 4 (TLR4), iNOS, COX-2, and the activation of NF-κB in the colon. HFD reduced the expression of tight junction-associated proteins claudin-1 and occludin in the colon. HFD mice demonstrated higher levels of Akt and FOXO3 phosphorylation in the colon compared to the LFD mice. While the body weight of HFD-fed mice was significantly increased in both TLR4-deficient and wild type mice, the epididymal fat weight and plasma endotoxin level of HFD-fed TLR4-deficient mice were 69% and 18% of HFD-fed wild type mice, respectively. Furthermore, HFD did not increase the proinflammatory cytokine levels in TLR4-deficient mice. Conclusions HFD induces inflammation by increasing endotoxin levels in the intestinal lumen as well as in the plasma by altering the gut microbiota composition and increasing its intestinal permeability through the induction of TLR4, thereby accelerating obesity.
                Bookmark

                Author and article information

                Contributors
                Role: Editor
                Journal
                mSystems
                msys
                msys
                mSystems
                mSystems
                American Society for Microbiology (1752 N St., N.W., Washington, DC )
                2379-5077
                29 September 2020
                Sep-Oct 2020
                : 5
                : 5
                : e00665-20
                Affiliations
                [a ]Department of Immunology, Weizmann Institute of Science, Rehovot, Israel
                [b ]Department of Surgery, Tel Aviv Sourasky Medical Center, Tel Aviv, Israel
                [c ]Department of Computer Science and Applied Mathematics, Weizmann Institute of Science, Rehovot, Israel
                [d ]Department of Molecular Cell Biology, Weizmann Institute of Science, Rehovot, Israel
                [e ]Division of Microbiome and Cancer, DKFZ, Heidelberg, Germany
                Institute for Systems Biology
                Author notes
                Address correspondence to Eran Segal, eran.segal@ 123456weizmann.ac.il , or Eran Elinav, eran.elinav@ 123456weizmann.ac.il .

                Conflict of Interest Disclosures for the Authors: Avner Leshem has nothing to disclose. Eran Elinav reports personal fees from DayTwo and BiomX during the conduct of the study and has a patent on prediction of personalized nutritional responses with royalties paid to DayTwo. Eran Segal reports personal fees from DayTwo during the conduct of the study and has a patent on prediction of personalized nutritional responses with royalties paid to DayTwo.

                Conflict of Interest Disclosures for the Editor: Sean M. Gibbons has nothing to disclose.

                Citation Leshem A, Segal E, Elinav E. 2020. The gut microbiome and individual-specific responses to diet. mSystems 5:e00665-20. https://doi.org/10.1128/mSystems.00665-20.

                Author information
                https://orcid.org/0000-0002-5775-2110
                Article
                mSystems00665-20
                10.1128/mSystems.00665-20
                7527138
                32994289
                c015af22-60a0-41b8-b61d-cad8d3b0564a
                Copyright © 2020 Leshem et al.

                This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license.

                History
                Page count
                Figures: 2, Tables: 0, Equations: 0, References: 168, Pages: 12, Words: 10575
                Categories
                Minireview
                Clinical Science and Epidemiology
                Sponsored Content
                Custom metadata
                September/October 2020

                machine learning,microbiome,personalized nutrition
                machine learning, microbiome, personalized nutrition

                Comments

                Comment on this article