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      Serum metabolite profiles are associated with the presence of advanced liver fibrosis in Chinese patients with chronic hepatitis B viral infection

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          Abstract

          Background

          Accurate and noninvasive diagnosis and staging of liver fibrosis are essential for effective clinical management of chronic liver disease (CLD). We aimed to identify serum metabolite markers that reliably predict the stage of fibrosis in CLD patients.

          Methods

          We quantitatively profiled serum metabolites of participants in 2 independent cohorts. Based on the metabolomics data from cohort 1 (504 HBV associated liver fibrosis patients and 502 normal controls, NC), we selected a panel of 4 predictive metabolite markers. Consequently, we constructed 3 machine learning models with the 4 metabolite markers using random forest (RF), to differentiate CLD patients from normal controls (NC), to differentiate cirrhosis patients from fibrosis patients, and to differentiate advanced fibrosis from early fibrosis, respectively.

          Results

          The panel of 4 metabolite markers consisted of taurocholate, tyrosine, valine, and linoelaidic acid. The RF models of the metabolite panel demonstrated the strongest stratification ability in cohort 1 to diagnose CLD patients from NC (area under the receiver operating characteristic curve (AUROC) = 0.997 and the precision-recall curve (AUPR) = 0.994), to differentiate fibrosis from cirrhosis (0.941, 0.870), and to stage liver fibrosis (0.918, 0.892). The diagnostic accuracy of the models was further validated in an independent cohort 2 consisting of 300 CLD patients with chronic HBV infection and 90 NC. The AUCs of the models were consistently higher than APRI, FIB-4, and AST/ALT ratio, with both greater sensitivity and specificity.

          Conclusions

          Our study showed that this 4-metabolite panel has potential usefulness in clinical assessments of CLD progression in patients with chronic hepatitis B virus infection.

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          Most cited references30

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          Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing

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            Liver fibrosis.

            Liver fibrosis is the excessive accumulation of extracellular matrix proteins including collagen that occurs in most types of chronic liver diseases. Advanced liver fibrosis results in cirrhosis, liver failure, and portal hypertension and often requires liver transplantation. Our knowledge of the cellular and molecular mechanisms of liver fibrosis has greatly advanced. Activated hepatic stellate cells, portal fibroblasts, and myofibroblasts of bone marrow origin have been identified as major collagen-producing cells in the injured liver. These cells are activated by fibrogenic cytokines such as TGF-beta1, angiotensin II, and leptin. Reversibility of advanced liver fibrosis in patients has been recently documented, which has stimulated researchers to develop antifibrotic drugs. Emerging antifibrotic therapies are aimed at inhibiting the accumulation of fibrogenic cells and/or preventing the deposition of extracellular matrix proteins. Although many therapeutic interventions are effective in experimental models of liver fibrosis, their efficacy and safety in humans is unknown. This review summarizes recent progress in the study of the pathogenesis and diagnosis of liver fibrosis and discusses current antifibrotic strategies.
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              Plasma metabolomic profile in nonalcoholic fatty liver disease.

              The plasma profile of subjects with nonalcoholic fatty liver disease (NAFLD), steatosis, and steatohepatitis (NASH) was examined using an untargeted global metabolomic analysis to identify specific disease-related patterns and to identify potential noninvasive biomarkers. Plasma samples were obtained after an overnight fast from histologically confirmed nondiabetic subjects with hepatic steatosis (n = 11) or NASH (n = 24) and were compared with healthy, age- and sex-matched controls (n = 25). Subjects with NAFLD were obese, were insulin resistant, and had higher plasma concentrations of homocysteine and total cysteine and lower plasma concentrations of total glutathione. Metabolomic analysis showed markedly higher levels of glycocholate, taurocholate, and glycochenodeoxycholate in subjects with NAFLD. Plasma concentrations of long-chain fatty acids were lower and concentrations of free carnitine, butyrylcarnitine, and methylbutyrylcarnitine were higher in NASH. Several glutamyl dipeptides were higher whereas cysteine-glutathione levels were lower in NASH and steatosis. Other changes included higher branched-chain amino acids, phosphocholine, carbohydrates (glucose, mannose), lactate, pyruvate, and several unknown metabolites. Random forest analysis and recursive partitioning of the metabolomic data could separate healthy subjects from NAFLD with an error rate of approximately 8% and separate NASH from healthy controls with an error rate of 4%. Hepatic steatosis and steatohepatitis could not be separated using the metabolomic profile. Plasma metabolomic analysis revealed marked changes in bile salts and in biochemicals related to glutathione in subjects with NAFLD. Statistical analysis identified a panel of biomarkers that could effectively separate healthy controls from NAFLD and healthy controls from NASH. These biomarkers can potentially be used to follow response to therapeutic interventions. Copyright © 2011 Elsevier Inc. All rights reserved.
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                Author and article information

                Contributors
                liuliver@vip.sina.com
                wjia@cc.hawaii.edu
                Journal
                BMC Med
                BMC Med
                BMC Medicine
                BioMed Central (London )
                1741-7015
                5 June 2020
                5 June 2020
                2020
                : 18
                : 144
                Affiliations
                [1 ]GRID grid.412540.6, ISNI 0000 0001 2372 7462, E-Institute of Shanghai Municipal Education Committee, Institute of Interdisciplinary Integrative Medicine Research, , Shanghai University of Traditional Chinese Medicine, ; Shanghai, 201203 China
                [2 ]Human Metabolomics Institute, Inc., Shenzhen, 518109 Guangdong China
                [3 ]GRID grid.412540.6, ISNI 0000 0001 2372 7462, Key Laboratory of Liver and Kidney Diseases (Ministry of Education), Shuguang Hospital, , Shanghai University of Traditional Chinese Medicine, ; Shanghai, 201203 China
                [4 ]GRID grid.410445.0, ISNI 0000 0001 2188 0957, University of Hawaii Cancer Center, ; Honolulu, HI 96813 USA
                [5 ]GRID grid.412528.8, ISNI 0000 0004 1798 5117, Shanghai Key Laboratory of Diabetes Mellitus and Center for Translational Medicine, , Shanghai Jiao Tong University Affiliated Sixth People’s Hospital, ; Shanghai, 200233 China
                [6 ]GRID grid.8547.e, ISNI 0000 0001 0125 2443, Department of Endocrinology and Metabolism, Zhongshan Hospital, , Fudan University, ; Shanghai, 200032 China
                [7 ]GRID grid.412540.6, ISNI 0000 0001 2372 7462, Institute of Liver Diseases, Shuguang Hospital, , Shanghai University of Traditional Chinese Medicine, ; 528 Zhangheng Road, Shanghai, 201203 China
                [8 ]GRID grid.221309.b, ISNI 0000 0004 1764 5980, School of Chinese Medicine, , Hong Kong Baptist University, ; Kowloon Tong, Hong Kong, China
                Article
                1595
                10.1186/s12916-020-01595-w
                7273661
                32498677
                c10b96ec-0022-41bc-a5a0-92fc60c8df09
                © The Author(s) 2020

                Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver ( http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.

                History
                : 16 February 2020
                : 16 April 2020
                Funding
                Funded by: FundRef http://dx.doi.org/10.13039/100000054, National Cancer Institute;
                Award ID: 1U01CA188387-01A1
                Award Recipient :
                Categories
                Research Article
                Custom metadata
                © The Author(s) 2020

                Medicine
                bile acids,free fatty acids,amino acids,hepatitis b,chronic liver disease,liver fibrosis,metabolomics,random forest

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