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      Transcriptomics of Gabra4 knockout mice reveals common NMDAR pathways underlying autism, memory, and epilepsy

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          Abstract

          Autism spectrum disorder (ASD) is a neuronal developmental disorder with impaired social interaction and communication, often with abnormal intelligence and comorbidity with epilepsy. Disturbances in synaptic transmission, including the GABAergic, glutamatergic, and serotonergic systems, are known to be involved in the pathogenesis of this disorder, yet we do not know if there is a common molecular mechanism. As mutations in the GABAergic receptor subunit gene GABRA4 are reported in patients with ASD, we eliminated the Gabra4 gene in mice and found that the Gabra4 knockout mice showed autistic-like behavior, enhanced spatial memory, and attenuated susceptibility to pentylenetetrazol-induced seizures, a constellation of symptoms resembling human high-functioning autism. To search for potential molecular pathways involved in these phenotypes, we performed a hippocampal transcriptome profiling, constructed a hippocampal interactome network, and revealed an upregulation of the NMDAR system at the center of the converged pathways underlying high-functioning autism-like and anti-epilepsy phenotypes.

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          Most cited references50

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          The molecular biology of memory storage: a dialogue between genes and synapses.

          E R Kandel (2001)
          One of the most remarkable aspects of an animal's behavior is the ability to modify that behavior by learning, an ability that reaches its highest form in human beings. For me, learning and memory have proven to be endlessly fascinating mental processes because they address one of the fundamental features of human activity: our ability to acquire new ideas from experience and to retain these ideas over time in memory. Moreover, unlike other mental processes such as thought, language, and consciousness, learning seemed from the outset to be readily accessible to cellular and molecular analysis. I, therefore, have been curious to know: What changes in the brain when we learn? And, once something is learned, how is that information retained in the brain? I have tried to address these questions through a reductionist approach that would allow me to investigate elementary forms of learning and memory at a cellular molecular level-as specific molecular activities within identified nerve cells.
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            Mutations of the X-linked genes encoding neuroligins NLGN3 and NLGN4 are associated with autism.

            Many studies have supported a genetic etiology for autism. Here we report mutations in two X-linked genes encoding neuroligins NLGN3 and NLGN4 in siblings with autism-spectrum disorders. These mutations affect cell-adhesion molecules localized at the synapse and suggest that a defect of synaptogenesis may predispose to autism.
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              Linkage, association, and gene-expression analyses identify CNTNAP2 as an autism-susceptibility gene.

              Autism is a genetically complex neurodevelopmental syndrome in which language deficits are a core feature. We describe results from two complimentary approaches used to identify risk variants on chromosome 7 that likely contribute to the etiology of autism. A two-stage association study tested 2758 SNPs across a 10 Mb 7q35 language-related autism QTL in AGRE (Autism Genetic Resource Exchange) trios and found significant association with Contactin Associated Protein-Like 2 (CNTNAP2), a strong a priori candidate. Male-only containing families were identified as primarily responsible for this association signal, consistent with the strong male affection bias in ASD and other language-based disorders. Gene-expression analyses in developing human brain further identified CNTNAP2 as enriched in circuits important for language development. Together, these results provide convergent evidence for involvement of CNTNAP2, a Neurexin family member, in autism, and demonstrate a connection between genetic risk for autism and specific brain structures.
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                Author and article information

                Contributors
                xpyang1@smu.edu.cn
                Journal
                Mol Autism
                Mol Autism
                Molecular Autism
                BioMed Central (London )
                2040-2392
                7 February 2020
                7 February 2020
                2020
                : 11
                : 13
                Affiliations
                [1 ]GRID grid.284723.8, ISNI 0000 0000 8877 7471, Department of Obstetrics and Gynecology, Nanfang Hospital, , Southern Medical University, ; Guangzhou, 510515 China
                [2 ]GRID grid.412534.5, Institute of Neuroscience and Department of Neurology, , The Second Affiliated Hospital of Guangzhou Medical University, ; Guangzhou, 510260 China
                [3 ]GRID grid.284723.8, ISNI 0000 0000 8877 7471, Key Laboratory of Mental Health of the Ministry of Education, , Southern Medical University, ; Guangzhou, 510515 China
                [4 ]GRID grid.284723.8, ISNI 0000 0000 8877 7471, Department of Bioinformatics, School of Basic Medical Sciences, , Southern Medical University, ; 1838 N. Guangzhou Ave, Guangzhou, 510515 China
                [5 ]GRID grid.284723.8, ISNI 0000 0000 8877 7471, State Key Laboratory of Organ Failure Research, Guangdong-Hong Kong-Macao Greater Bay Area Center for Brain Science and Brain-Inspired Intelligence, Guangdong Key Laboratory of Psychiatric Disorders, Collaborative Innovation Center for Brain Science, Department of Neurobiology, , School of Basic Medical Sciences, Southern Medical University, ; Guangzhou, 510515 China
                [6 ]GRID grid.168645.8, ISNI 0000 0001 0742 0364, Department of Psychiatry, , University of Massachusetts Medical School, ; Worcester, MA 01655 USA
                Author information
                http://orcid.org/0000-0003-4086-4180
                Article
                318
                10.1186/s13229-020-0318-9
                7007694
                32033586
                c53fdbfb-4616-4179-bdb8-027d1e36a21e
                © The Author(s). 2020

                Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License ( http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver ( http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

                History
                : 2 September 2019
                : 26 January 2020
                Funding
                Funded by: FundRef http://dx.doi.org/10.13039/501100001809, National Natural Science Foundation of China;
                Award ID: 81571097
                Award Recipient :
                Funded by: FundRef http://dx.doi.org/10.13039/501100003453, Natural Science Foundation of Guangdong Province;
                Award ID: 2016A030308020
                Award ID: 2015B050501006
                Award Recipient :
                Funded by: Science and Technology Projects of Guangzhou
                Award ID: 201704020116
                Award Recipient :
                Funded by: Science and Technology Planning Project of Guangdong Province (CN)
                Award ID: 2018B030335001
                Award Recipient :
                Funded by: Technology Plan of Shunde District
                Award ID: 2015CXTD06
                Award Recipient :
                Categories
                Research
                Custom metadata
                © The Author(s) 2020

                Neurosciences
                gabra4,autism,epilepsy,transcriptome,nmdars,interactome
                Neurosciences
                gabra4, autism, epilepsy, transcriptome, nmdars, interactome

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