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      Convergent evolution of the sensory pits in and within flatworms

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          Abstract

          Background

          Unlike most free-living platyhelminths, catenulids, the sister group to all remaining flatworms, do not have eyes. Instead, the most prominent sensory structures in their heads are statocysts or sensory pits. The latter, found in the family Stenostomidae, are concave depressions located laterally on the head that represent one of the taxonomically important traits of the family. In the past, the sensory pits of flatworms have been homologized with the cephalic organs of nemerteans, a clade that occupies a sister position to platyhelminths in some recent phylogenies. To test for this homology, we studied morphology and gene expression in the sensory pits of the catenulid Stenostomum brevipharyngium.

          Results

          We used confocal and electron microscopy to investigate the detailed morphology of the sensory pits, as well as their formation during regeneration and asexual reproduction. The most prevalent cell type within the organ is epidermally-derived neuron-like cells that have cell bodies embedded deeply in the brain lobes and long neurite-like processes extending to the bottom of the pit. Those elongated processes are adorned with extensive microvillar projections that fill up the cavity of the pit, but cilia are not associated with the sensory pit. We also studied the expression patterns of some of the transcription factors expressed in the nemertean cephalic organs during the development of the pits . Only a single gene, pax4/6, is expressed in both the cerebral organs of nemerteans and sensory pits of S. brevipharyngium, challenging the idea of their deep homology.

          Conclusions

          Since there is no morphological or molecular correspondence between the sensory pits of Stenostomum and the cerebral organs of nemerteans, we reject their homology. Interestingly, the major cell type contributing to the sensory pits of stenostomids shows ultrastructural similarities to the rhabdomeric photoreceptors of other flatworms and expresses ortholog of the gene pax4/6, the pan-bilaterian master regulator of eye development. We suggest that the sensory pits of stenostomids might have evolved from the ancestral rhabdomeric photoreceptors that lost their photosensitivity and evolved secondary function. The mapping of head sensory structures on plathelminth phylogeny indicates that sensory pit-like organs evolved many times independently in flatworms.

          Supplementary Information

          The online version contains supplementary material available at 10.1186/s12915-023-01768-y.

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          Fiji: an open-source platform for biological-image analysis.

          Fiji is a distribution of the popular open-source software ImageJ focused on biological-image analysis. Fiji uses modern software engineering practices to combine powerful software libraries with a broad range of scripting languages to enable rapid prototyping of image-processing algorithms. Fiji facilitates the transformation of new algorithms into ImageJ plugins that can be shared with end users through an integrated update system. We propose Fiji as a platform for productive collaboration between computer science and biology research communities.
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            MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

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              ModelFinder: Fast Model Selection for Accurate Phylogenetic Estimates

              Model-based molecular phylogenetics plays an important role in comparisons of genomic data, and model selection is a key step in all such analyses. We present ModelFinder, a fast model-selection method that greatly improves the accuracy of phylogenetic estimates. The improvement is achieved by incorporating a model of rate-heterogeneity across sites not previously considered in this context, and by allowing concurrent searches of model-space and tree-space.
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                Author and article information

                Contributors
                ludwik.gasiorowski@mpinat.mpg.de
                jochen.rink@mpinat.mpg.de
                Journal
                BMC Biol
                BMC Biol
                BMC Biology
                BioMed Central (London )
                1741-7007
                22 November 2023
                22 November 2023
                2023
                : 21
                : 266
                Affiliations
                [1 ]Department of Tissue Dynamics and Regeneration, Max Planck Institute for Multidisciplinary Sciences, ( https://ror.org/03av75f26) Am Fassberg 11, 37077 Göttingen, Germany
                [2 ]Institut Für Zoologie, Universität Innsbruck, ( https://ror.org/054pv6659) Technikerstraße 25 6020, Innsbruck, Austria
                [3 ]Electron Microscopy Facility, Department of Neurogenetics, Max Planck Institute for Multidisciplinary Sciences, ( https://ror.org/03av75f26) City Campus, Hermann-Rein-Str. 3, 37075 Göttingen, Germany
                Author information
                http://orcid.org/0000-0003-2238-7587
                http://orcid.org/0000-0003-1903-4764
                http://orcid.org/0000-0001-6126-8279
                http://orcid.org/0000-0002-9535-9395
                http://orcid.org/0000-0002-2902-7165
                http://orcid.org/0000-0001-6353-9458
                http://orcid.org/0000-0001-6381-6742
                Article
                1768
                10.1186/s12915-023-01768-y
                10664644
                d739d542-f345-40b2-8597-5fc0cc8d2eb6
                © The Author(s) 2023

                Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver ( http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.

                History
                : 18 June 2023
                : 13 November 2023
                Funding
                Funded by: FundRef http://dx.doi.org/10.13039/100005156, Alexander von Humboldt-Stiftung;
                Funded by: FundRef http://dx.doi.org/10.13039/501100001822, Österreichischen Akademie der Wissenschaften;
                Funded by: FundRef http://dx.doi.org/10.13039/501100004189, Max-Planck-Gesellschaft;
                Funded by: Max Planck Institute for Multidisciplinary Sciences (2)
                Categories
                Research Article
                Custom metadata
                © BioMed Central Ltd., part of Springer Nature 2023

                Life sciences
                regeneration,paratomy,asexual reproduction,rhabdomeric photoreceptors,morphology,spiralia,turbellaria

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