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      Prototype Smartphone-Based Device for Flow Cytometry with Immunolabeling via Supra-nanoparticle Assemblies of Quantum Dots

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          Abstract

          Methods for the detection, enumeration, and typing of cells are important in many areas of research and healthcare. In this context, flow cytometers are a widely used research and clinical tool but are also an example of a large and expensive instrument that is limited to specialized laboratories. Smartphones have been shown to have excellent potential to serve as portable and lower-cost platforms for analyses that would normally be done in a laboratory. Here, we developed a prototype smartphone-based flow cytometer (FC). This compact 3D-printed device incorporated a laser diode and a microfluidic flow cell and used the built-in camera of a smartphone to track immunofluorescently labeled cells in suspension and measure their color. This capability was enabled by high-brightness supra-nanoparticle assemblies of colloidal semiconductor quantum dots (SiO 2@QDs) as well as a support vector machine (SVM) classification algorithm. The smartphone-based FC device detected and enumerated target cells against a background of other cells, simultaneously and selectively counted two different cell types in a mixture, and used multiple colors of SiO 2@QD-antibody conjugates to screen for and identify a particular cell type. The potential limits of multicolor detection are discussed alongside ideas for further development. Our results suggest that innovations in materials and engineering should enable eventual smartphone-based FC assays for clinical applications.

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          Synthesis and characterization of nearly monodisperse CdE (E = sulfur, selenium, tellurium) semiconductor nanocrystallites

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            Breast Cancer Cell Line Classification and Its Relevance with Breast Tumor Subtyping

            Breast cancer cell lines have been widely used for breast cancer modelling which encompasses a panel of diseases with distinct phenotypical associations. Though cell lines provide unlimited homogenous materials for tumor studies and are relatively easy to culture, they are known to accumulate mutations duringthe initial establishment and subsequent series of cultivations. Thus, whether breast cancer cell line heterogeneity reflects that of carcinoma remains an important issue to resolve before drawing any reliable conclusion at the tumor level using cell lines. Inconsistent nomenclatures used for breast cancer cell line subtyping and the different number of subtypes grouped for cell lines and tumors make their direct matching elusive. By analyzing the molecular features of 92 breast cancer cell lines as documented by different literatures, we categorize 84 cell lines into 5 groups to be consistent with breast tumor classification. After combing through these cell lines, we summarized the molecular features, genetically and epigenetically, of each subtype, and manually documented 10 cell lines lacking explicit information on subtyping. Nine cell lines, either found inconsistent on their primary molecular features from different studies or being contaminated at the origin, are not suggested as the first choice for experimental use. We conclude that breast tumor cell lines, though having a high mutational frequency with many uncertainties and could not fully capture breast cancer heterogeneity, are feasible but crude models for tumors of the same subtype. New cell lines with enriched interferon regulated genes need to be established to enlarge the coverage of cell lines on tumor heterogeneity.
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              A deep profiler's guide to cytometry.

              In recent years, advances in technology have provided us with tools to quantify the expression of multiple genes in individual cells. The ability to measure simultaneously multiple genes in the same cell is necessary to resolve the great diversity of cell subsets, as well as to define their function in the host. Fluorescence-based flow cytometry is the benchmark for this; with it, we can quantify 18 proteins per cell, at >10 000 cells/s. Mass cytometry is a new technology that promises to extend these capabilities significantly. Immunophenotyping by mass spectrometry provides the ability to measure >36 proteins at a rate of 1000 cells/s. We review these cytometric technologies, capable of high-content, high-throughput single-cell assays. Published by Elsevier Ltd.
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                Author and article information

                Journal
                ACS Meas Sci Au
                ACS Meas Sci Au
                tg
                amachv
                ACS Measurement Science Au
                American Chemical Society
                2694-250X
                05 November 2021
                16 February 2022
                : 2
                : 1
                : 57-66
                Affiliations
                []Department of Chemistry, University of British Columbia , 2036 Main Mall, Vancouver, British Columbia V6T 1Z1, Canada
                []Jacobs Corporation , Hanover, Maryland 21076, United States
                [§ ]Optical Sciences Division, Code 5600, U.S. Naval Research Laboratory , Washington, D.C. 20375, United States
                []Center for Bio/Molecular Science and Engineering, Code 6900, U.S. Naval Research Laboratory , Washington, D.C. 20375, United States
                Author notes
                Author information
                https://orcid.org/0000-0003-4389-2574
                https://orcid.org/0000-0002-8902-4687
                https://orcid.org/0000-0003-3442-7072
                Article
                10.1021/acsmeasuresciau.1c00033
                9838726
                dbc599e4-69c0-42a8-9ba2-1c0339b9875d
                © 2021 The Authors. Published by American Chemical Society

                Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained ( https://creativecommons.org/licenses/by/4.0/).

                History
                Funding
                Funded by: U.S. Naval Research Laboratory, doi 10.13039/100009917;
                Award ID: NA
                Funded by: British Columbia Knowledge Development Fund, doi 10.13039/501100007711;
                Award ID: NA
                Funded by: University of British Columbia, doi 10.13039/501100005247;
                Award ID: NA
                Funded by: Canada Research Chairs, doi 10.13039/501100001804;
                Award ID: NA
                Funded by: Canada Foundation for Innovation, doi 10.13039/501100000196;
                Award ID: NA
                Funded by: Natural Sciences and Engineering Research Council of Canada, doi 10.13039/501100000038;
                Award ID: NA
                Categories
                Article
                Custom metadata
                tg1c00033
                tg1c00033

                immunofluorescence,flow cytometry,imaging,microfluidic,smartphone,quantum dots

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