4
views
0
recommends
+1 Recommend
0 collections
    0
    shares
      • Record: found
      • Abstract: found
      • Article: found
      Is Open Access

      Two different isoforms of osteopontin modulate myelination and axonal integrity

      research-article

      Read this article at

      Bookmark
          There is no author summary for this article yet. Authors can add summaries to their articles on ScienceOpen to make them more accessible to a non-specialist audience.

          Abstract

          Abnormal myelination underlies the pathology of white matter diseases such as preterm white matter injury and multiple sclerosis. Osteopontin (OPN) has been suggested to play a role in myelination. Murine OPN mRNA is translated into a secreted isoform (sOPN) or an intracellular isoform (iOPN). Whether there is an isoform‐specific involvement of OPN in myelination is unknown. Here we generated mouse models that either lacked both OPN isoforms in all cells (OPN‐KO) or lacked sOPN systemically but expressed iOPN specifically in oligodendrocytes (OLs‐iOPN‐KI). Transcriptome analysis of isolated oligodendrocytes from the neonatal brain showed that genes and pathways related to increase of myelination and altered cell cycle control were enriched in the absence of the two OPN isoforms in OPN‐KO mice compared to control mice. Accordingly, adult OPN‐KO mice showed an increased axonal myelination, as revealed by transmission electron microscopy imaging, and increased expression of myelin‐related proteins. In contrast, neonatal oligodendrocytes from OLs‐iOPN‐KI mice compared to control mice showed differential regulation of genes and pathways related to the increase of cell adhesion, motility, and vasculature development, and the decrease of axonal/neuronal development. OLs‐iOPN‐KI mice showed abnormal myelin formation in the early phase of myelination in young mice and signs of axonal degeneration in adulthood. These results suggest an OPN isoform‐specific involvement, and a possible interplay between the isoforms, in myelination, and axonal integrity. Thus, the two isoforms of OPN need to be separately considered in therapeutic strategies targeting OPN in white matter injury and diseases.

          Abstract

          Distinct myelination phenotypes were observed in mouse models lacking both isoforms of osteopontin (OPN‐KO) and those expressing only intracellular OPN in oligodendrocytes (OLs) (iOPN‐KI). RNA‐sequencing (RNA‐seq) of isolated OLs and transmission electron microscopy (TEM) were performed. OPN‐KO mice exhibited enhanced myelination, whereas iOPN‐KI mice showed aberrant myelin formation and indications of axonal degeneration. Our findings emphasize the necessity of individually considering the two OPN isoforms in white matter development and disease. Rendered using BioRender.com.

          Related collections

          Most cited references65

          • Record: found
          • Abstract: found
          • Article: found
          Is Open Access

          The ARRIVE guidelines 2.0: Updated guidelines for reporting animal research

          Reproducible science requires transparent reporting. The ARRIVE guidelines (Animal Research: Reporting of In Vivo Experiments) were originally developed in 2010 to improve the reporting of animal research. They consist of a checklist of information to include in publications describing in vivo experiments to enable others to scrutinise the work adequately, evaluate its methodological rigour, and reproduce the methods and results. Despite considerable levels of endorsement by funders and journals over the years, adherence to the guidelines has been inconsistent, and the anticipated improvements in the quality of reporting in animal research publications have not been achieved. Here, we introduce ARRIVE 2.0. The guidelines have been updated and information reorganised to facilitate their use in practice. We used a Delphi exercise to prioritise and divide the items of the guidelines into 2 sets, the “ARRIVE Essential 10,” which constitutes the minimum requirement, and the “Recommended Set,” which describes the research context. This division facilitates improved reporting of animal research by supporting a stepwise approach to implementation. This helps journal editors and reviewers verify that the most important items are being reported in manuscripts. We have also developed the accompanying Explanation and Elaboration (E&E) document, which serves (1) to explain the rationale behind each item in the guidelines, (2) to clarify key concepts, and (3) to provide illustrative examples. We aim, through these changes, to help ensure that researchers, reviewers, and journal editors are better equipped to improve the rigour and transparency of the scientific process and thus reproducibility.
            Bookmark
            • Record: found
            • Abstract: found
            • Article: found
            Is Open Access

            WebGestalt 2019: gene set analysis toolkit with revamped UIs and APIs

            Abstract WebGestalt is a popular tool for the interpretation of gene lists derived from large scale -omics studies. In the 2019 update, WebGestalt supports 12 organisms, 342 gene identifiers and 155 175 functional categories, as well as user-uploaded functional databases. To address the growing and unique need for phosphoproteomics data interpretation, we have implemented phosphosite set analysis to identify important kinases from phosphoproteomics data. We have completely redesigned result visualizations and user interfaces to improve user-friendliness and to provide multiple types of interactive and publication-ready figures. To facilitate comprehension of the enrichment results, we have implemented two methods to reduce redundancy between enriched gene sets. We introduced a web API for other applications to get data programmatically from the WebGestalt server or pass data to WebGestalt for analysis. We also wrapped the core computation into an R package called WebGestaltR for users to perform analysis locally or in third party workflows. WebGestalt can be freely accessed at http://www.webgestalt.org.
              Bookmark
              • Record: found
              • Abstract: found
              • Article: not found

              GOplot: an R package for visually combining expression data with functional analysis.

              Despite the plethora of methods available for the functional analysis of omics data, obtaining comprehensive-yet detailed understanding of the results remains challenging. This is mainly due to the lack of publicly available tools for the visualization of this type of information. Here we present an R package called GOplot, based on ggplot2, for enhanced graphical representation. Our package takes the output of any general enrichment analysis and generates plots at different levels of detail: from a general overview to identify the most enriched categories (bar plot, bubble plot) to a more detailed view displaying different types of information for molecules in a given set of categories (circle plot, chord plot, cluster plot). The package provides a deeper insight into omics data and allows scientists to generate insightful plots with only a few lines of code to easily communicate the findings.
                Bookmark

                Author and article information

                Contributors
                jleavenworth@uabmc.edu
                xiaoyang.wang@fysiologi.gu.se
                Journal
                FASEB Bioadv
                FASEB Bioadv
                10.1096/(ISSN)2573-9832
                FBA2
                FASEB BioAdvances
                John Wiley and Sons Inc. (Hoboken )
                2573-9832
                17 June 2023
                August 2023
                : 5
                : 8 ( doiID: 10.1002/fba2.v5.8 )
                : 336-353
                Affiliations
                [ 1 ] Centre of Perinatal Medicine & Health, Department of Physiology, Institute of Neuroscience and Physiology, Sahlgrenska Academy University of Gothenburg Gothenburg Sweden
                [ 2 ] Department of Physiology and Pharmacology Karolinska Institute Stockholm Sweden
                [ 3 ] Dr Margarete Fischer‐Bosch Institute of Clinical Pharmacology Stuttgart Germany
                [ 4 ] University of Tübingen Tübingen Germany
                [ 5 ] Henan Key Laboratory of Child Brain Injury Institute of Neuroscience and Third Affiliated Hospital of Zhengzhou University Zhengzhou China
                [ 6 ] Department of Cardiology, Ruijin Hospital/Luwan Branch, School of Medicine Shanghai Jiao Tong University Shanghai China
                [ 7 ] Centre of Perinatal Medicine & Health, Department of Obstetrics and Gynaecology, Institute of Clinical Sciences, Sahlgrenska Academy University of Gothenburg Gothenburg Sweden
                [ 8 ] Department of Neurosurgery University of Alabama at Birmingham Birmingham Alabama USA
                [ 9 ] Department of Microbiology University of Alabama at Birmingham Birmingham Alabama USA
                Author notes
                [*] [* ] Correspondence

                Jianmei W. Leavenworth, Department of Neurosurgery, University of Alabama at Birmingham, Birmingham, AL 35233, USA.

                Email: jleavenworth@ 123456uabmc.edu

                Xiaoyang Wang, Centre of Perinatal Medicine & Health, Department of Obstetrics and Gynaecology, Institute of Clinical Sciences, Sahlgrenska Academy, University of Gothenburg, Box 432, SE‐405 30 Gothenburg, Sweden.

                Email: xiaoyang.wang@ 123456fysiologi.gu.se

                Author information
                https://orcid.org/0000-0003-4423-5082
                https://orcid.org/0000-0002-3677-2198
                https://orcid.org/0000-0002-5851-6355
                https://orcid.org/0000-0002-1140-6204
                https://orcid.org/0000-0002-5764-7679
                https://orcid.org/0000-0003-3414-1584
                https://orcid.org/0000-0001-5111-9405
                https://orcid.org/0000-0001-8953-919X
                https://orcid.org/0000-0003-3962-1448
                https://orcid.org/0000-0002-4100-9883
                https://orcid.org/0000-0001-9717-8160
                Article
                FBA21405 2023-00030-T
                10.1096/fba.2023-00030
                10405251
                ea552cda-e3f9-4217-b30b-9ddd440bb9e0
                © 2023 The Authors. FASEB BioAdvances published by Wiley Periodicals LLC on behalf of The Federation of American Societies for Experimental Biology.

                This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.

                History
                : 22 May 2023
                : 18 March 2023
                : 06 June 2023
                Page count
                Figures: 10, Tables: 0, Pages: 18, Words: 9218
                Funding
                Funded by: Swedish Research Council , doi 10.13039/501100004359;
                Award ID: 2019‐01837
                Award ID: 2016‐01154
                Award ID: 2016‐01153
                Award ID: 202101872
                Award ID: 2019‐01320
                Award ID: 2021‐01950
                Award ID: 2018‐02682
                Award ID: 2015‐06276
                Funded by: Brain Foundation , doi 10.13039/501100000942;
                Award ID: FO2019‐0056
                Award ID: FO2017‐0102
                Funded by: Swedish Government
                Award ID: ALFGBG‐966107
                Award ID: ALFGBG‐432291
                Award ID: ALFBG‐966034
                Award ID: ALFGBG‐813291
                Award ID: ALFGBG‐429801
                Funded by: National Natural Science Foundation of China , doi 10.13039/501100001809;
                Award ID: 81771418
                Funded by: W o M Lundgren
                Award ID: 3126‐2019
                Award ID: 1804‐2017
                Award ID: 1320‐2016
                Funded by: Castegrens minne
                Award ID: LA2016‐0404
                Funded by: Goljes minne
                Award ID: LA2015‐0255
                Funded by: Mary von Sydow
                Award ID: 3618
                Award ID: 4617
                Funded by: Åhlénstiftelsen
                Award ID: mH3h18
                Award ID: 193054
                Funded by: Elisabeth “Bollan” Lindén
                Funded by: Swedish Strategic Research Programme in Diabetes (SFO Diabetes)
                Funded by: Stem Cells and Regenerative Medicine (SFO StratRegen)
                Funded by: Chinese Scholarship Council
                Award ID: 201407040032
                Funded by: Health Commission of Henan Province
                Award ID: 2018069
                Funded by: Henan Administration of Foreign Experts Affairs
                Award ID: 2019023
                Categories
                Research Article
                Research Articles
                Custom metadata
                2.0
                August 2023
                Converter:WILEY_ML3GV2_TO_JATSPMC version:6.3.2 mode:remove_FC converted:07.08.2023

                myelin,oligodendrocytes,osteopontin isoforms,rna‐sequencing

                Comments

                Comment on this article