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      Effect of sulfate on low-temperature anaerobic digestion

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          Abstract

          The effect of sulfate addition on the stability of, and microbial community behavior in, low-temperature anaerobic expanded granular sludge bed-based bioreactors was investigated at 15°C. Efficient bioreactor performance was observed, with chemical oxygen demand (COD) removal efficiencies of >90%, and a mean SO 2− 4 removal rate of 98.3%. In situ methanogensis appeared unaffected at a COD: SO 2− 4 influent ratio of 8:1, and subsequently of 3:1, and was impacted marginally only when the COD: SO 2− 4 ratio was 1:2. Specific methanogenic activity assays indicated a complex set of interactions between sulfate-reducing bacteria (SRB), methanogens and homoacetogenic bacteria. SO 2− 4 addition resulted in predominantly acetoclastic, rather than hydrogenotrophic, methanogenesis until >600 days of SO 2− 4-influenced bioreactor operation. Temporal microbial community development was monitored by denaturation gradient gel electrophoresis (DGGE) of 16S rRNA genes. Fluorescence in situ hybridizations (FISH), qPCR and microsensor analysis were combined to investigate the distribution of microbial groups, and particularly SRB and methanogens, along the structure of granular biofilms. qPCR data indicated that sulfidogenic genes were present in methanogenic and sulfidogenic biofilms, indicating the potential for sulfate reduction even in bioreactors not exposed to SO 2− 4. Although the architecture of methanogenic and sulfidogenic granules was similar, indicating the presence of SRB even in methanogenic systems, FISH with rRNA targets found that the SRB were more abundant in the sulfidogenic biofilms. Methanosaeta species were the predominant, keystone members of the archaeal community, with the complete absence of the Methanosarcina species in the experimental bioreactor by trial conclusion. Microsensor data suggested the ordered distribution of sulfate reduction and sulfide accumulation, even in methanogenic granules.

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          The ecology and biotechnology of sulphate-reducing bacteria.

          Sulphate-reducing bacteria (SRB) are anaerobic microorganisms that use sulphate as a terminal electron acceptor in, for example, the degradation of organic compounds. They are ubiquitous in anoxic habitats, where they have an important role in both the sulphur and carbon cycles. SRB can cause a serious problem for industries, such as the offshore oil industry, because of the production of sulphide, which is highly reactive, corrosive and toxic. However, these organisms can also be beneficial by removing sulphate and heavy metals from waste streams. Although SRB have been studied for more than a century, it is only with the recent emergence of new molecular biological and genomic techniques that we have begun to obtain detailed information on their way of life.
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            Group-specific primer and probe sets to detect methanogenic communities using quantitative real-time polymerase chain reaction.

            Real-time polymerase chain reaction (PCR) is a highly sensitive method that can be used for the detection and quantification of microbial populations without cultivating them in anaerobic processes and environmental samples. This work was conducted to design primer and probe sets for the detection of methanogens using a real-time PCR with the TaqMan system. Six group-specific methanogenic primer and probe sets were designed. These sets separately detect four orders (Methanococcales, Methanobacteriales, Methanomicrobiales, and Methanosarcinales) along with two families (Methanosarcinaceae and Methanosaetaceae) of the order Methanosarcinales. We also designed the universal primer and probe sets that specifically detect the 16S rDNA of prokaryotes and of the domain Bacteria and Archaea, and which are fully compatible with the TaqMan real-time PCR system. Target-group specificity of each primer and probe set was empirically verified by testing DNA isolated from 28 archaeal cultures and by analyzing potential false results. In general, each primer and probe set was very specific to the target group. The primer and probe sets designed in this study can be used to detect and quantify the order-level (family-level in the case of Methanosarcinales) methanogenic groups in anaerobic biological processes and various environments.
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              Electron transfer in syntrophic communities of anaerobic bacteria and archaea.

              Interspecies electron transfer is a key process in methanogenic and sulphate-reducing environments. Bacteria and archaea that live in syntrophic communities take advantage of the metabolic abilities of their syntrophic partner to overcome energy barriers and break down compounds that they cannot digest by themselves. Here, we review the transfer of hydrogen and formate between bacteria and archaea that helps to sustain growth in syntrophic methanogenic communities. We also describe the process of reverse electron transfer, which is a key requirement in obligately syntrophic interactions. Anaerobic methane oxidation coupled to sulphate reduction is also carried out by syntrophic communities of bacteria and archaea but, as we discuss, the exact mechanism of this syntrophic interaction is not yet understood.
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                Author and article information

                Contributors
                Journal
                Front Microbiol
                Front Microbiol
                Front. Microbiol.
                Frontiers in Microbiology
                Frontiers Media S.A.
                1664-302X
                24 July 2014
                2014
                : 5
                : 376
                Affiliations
                [1] 1Microbiology, School of Natural Sciences, National University of Ireland Galway Galway, Ireland
                [2] 2Department of Biogeochemistry, Max Planck Institute for Marine Microbiology Bremen, Germany
                [3] 3Centre for Resource Management and Efficiency, School of Applied Science, Cranfield University Bedfordshire, UK
                [4] 4Ryan Institute for Environmental, Marine and Energy Research, National University of Ireland Galway Galway, Ireland
                [5] 5Infrastructure and Environment, School of Engineering, University of Glasgow UK
                Author notes

                Edited by: Aurelio Briones, University of Idaho, USA

                Reviewed by: Johannes Scholten, Synthetic Genomics, USA; Naresh Singhal, The University of Auckland, New Zealand; Daniel Puyol, University of Queensland, Australia

                *Correspondence: Gavin Collins, School of Natural Sciences, National University of Ireland Galway, University Road, Galway, Ireland e-mail: gavin.collins@ 123456nuigalway.ie

                This article was submitted to Microbiotechnology, Ecotoxicology and Bioremediation, a section of the journal Frontiers in Microbiology.

                †Present address: Anne M. Enright, Galway-Mayo Institute of Technology, Galway, Ireland;

                Fabio A. Chinalia, Federal University of Salvador, Salvador, Brazil

                Article
                10.3389/fmicb.2014.00376
                4110509
                25120534
                eb26727f-d261-49aa-9247-1e9b238234d6
                Copyright © 2014 Madden, Al-Raei, Enright, Chinalia, de Beer, O'Flaherty and Collins.

                This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

                History
                : 22 April 2014
                : 03 July 2014
                Page count
                Figures: 6, Tables: 5, Equations: 0, References: 64, Pages: 15, Words: 9440
                Categories
                Microbiology
                Original Research Article

                Microbiology & Virology
                biogas,low-temperature anaerobic digestion,sulfate,sulfide,methane,methanogenesis,wastewater

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