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      Cluster-based computational methods for mass univariate analyses of event-related brain potentials/fields: A simulation study

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          Abstract

          Background

          In recent years, analyses of event related potentials/fields have moved from the selection of a few components and peaks to a mass-univariate approach in which the whole data space is analyzed. Such extensive testing increases the number of false positives and correction for multiple comparisons is needed.

          Method

          Here we review all cluster-based correction for multiple comparison methods (cluster-height, cluster-size, cluster-mass, and threshold free cluster enhancement – TFCE), in conjunction with two computational approaches (permutation and bootstrap).

          Results

          Data driven Monte-Carlo simulations comparing two conditions within subjects (two sample Student's t-test) showed that, on average, all cluster-based methods using permutation or bootstrap alike control well the family-wise error rate (FWER), with a few caveats.

          Conclusions

          (i) A minimum of 800 iterations are necessary to obtain stable results; (ii) below 50 trials, bootstrap methods are too conservative; (iii) for low critical family-wise error rates (e.g. p = 1%), permutations can be too liberal; (iv) TFCE controls best the type 1 error rate with an attenuated extent parameter (i.e. power < 1).

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          Most cited references14

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          Multiple Comparisons among Means

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            Unveiling the Biometric Potential of Finger-Based ECG Signals

            The ECG signal has been shown to contain relevant information for human identification. Even though results validate the potential of these signals, data acquisition methods and apparatus explored so far compromise user acceptability, requiring the acquisition of ECG at the chest. In this paper, we propose a finger-based ECG biometric system, that uses signals collected at the fingers, through a minimally intrusive 1-lead ECG setup recurring to Ag/AgCl electrodes without gel as interface with the skin. The collected signal is significantly more noisy than the ECG acquired at the chest, motivating the application of feature extraction and signal processing techniques to the problem. Time domain ECG signal processing is performed, which comprises the usual steps of filtering, peak detection, heartbeat waveform segmentation, and amplitude normalization, plus an additional step of time normalization. Through a simple minimum distance criterion between the test patterns and the enrollment database, results have revealed this to be a promising technique for biometric applications.
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              Global, voxel, and cluster tests, by theory and permutation, for a difference between two groups of structural MR images of the brain.

              We describe almost entirely automated procedures for estimation of global, voxel, and cluster-level statistics to test the null hypothesis of zero neuroanatomical difference between two groups of structural magnetic resonance imaging (MRI) data. Theoretical distributions under the null hypothesis are available for 1) global tissue class volumes; 2) standardized linear model [analysis of variance (ANOVA and ANCOVA)] coefficients estimated at each voxel; and 3) an area of spatially connected clusters generated by applying an arbitrary threshold to a two-dimensional (2-D) map of normal statistics at voxel level. We describe novel methods for economically ascertaining probability distributions under the null hypothesis, with fewer assumptions, by permutation of the observed data. Nominal Type I error control by permutation testing is generally excellent; whereas theoretical distributions may be over conservative. Permutation has the additional advantage that it can be used to test any statistic of interest, such as the sum of suprathreshold voxel statistics in a cluster (or cluster mass), regardless of its theoretical tractability under the null hypothesis. These issues are illustrated by application to MRI data acquired from 18 adolescents with hyperkinetic disorder and 16 control subjects matched for age and gender.
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                Author and article information

                Contributors
                Journal
                J Neurosci Methods
                J. Neurosci. Methods
                Journal of Neuroscience Methods
                Elsevier/North-Holland Biomedical Press
                0165-0270
                1872-678X
                30 July 2015
                30 July 2015
                : 250
                : 85-93
                Affiliations
                [a ]Centre for Clinical Brain Sciences, Neuroimaging Sciences, University of Edinburgh, Edinburgh, UK
                [b ]Institut de Neurosciences de la Timone UMR 7289, Aix Marseille Université, CNRS, 13385 Marseille, France
                [c ]Department of Statistics, Warwick University, Coventry, UK
                [d ]Institute of Neuroscience and Psychology, University of Glasgow, Glasgow, UK
                Author notes
                [* ]Corresponding author at: Centre for Clinical Brain Sciences (CCBS), Neuroimaging Sciences, The University of Edinburgh, Chancellor's Building, Room GU426D, 49 Little France Crescent, Edinburgh EH16 4SB, UK. Tel.: +44 1314659530. cyril.pernet@ 123456ed.ac.uk
                Article
                S0165-0270(14)00287-8
                10.1016/j.jneumeth.2014.08.003
                4510917
                25128255
                fe81489d-a2eb-4106-a9f9-b21e64b68be4
                Crown Copyright © Published by Elsevier B.V. All rights reserved.

                This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/3.0/).

                History
                : 26 May 2014
                : 16 July 2014
                : 5 August 2014
                Categories
                Computational Neuroscience

                Neurosciences
                erp,family-wise error rate,multiple comparison correction,cluster-based statistics,threshold free cluster enhancement,monte-carlo simulations

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