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      Deep Learning–Based Automatic Segmentation of Lumbosacral Nerves on CT for Spinal Intervention: A Translational Study

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          Abstract

          BACKGROUND AND PURPOSE:

          3D reconstruction of a targeted area (“safe” triangle and Kambin triangle) may benefit the viability assessment of transforaminal epidural steroid injection, especially at the L5/S1 level. However, manual segmentation of lumbosacral nerves for 3D reconstruction is time-consuming. The aim of this study was to investigate the feasibility of deep learning–based segmentation of lumbosacral nerves on CT and the reconstruction of the safe triangle and Kambin triangle.

          MATERIALS AND METHODS:

          A total of 50 cases of spinal CT were manually labeled for lumbosacral nerves and bones using Slicer 4.8. The ratio of training/validation/testing was 32:8:10. A 3D U-Net was adopted to build the model SPINECT for automatic segmentations of lumbosacral structures. The Dice score, pixel accuracy, and Intersection over Union were computed to assess the segmentation performance of SPINECT. The areas of Kambin and safe triangles were measured to validate the 3D reconstruction.

          RESULTS:

          The results revealed successful segmentation of lumbosacral bone and nerve on CT. The average pixel accuracy for bone was 0.940, and for nerve, 0.918. The average Intersection over Union for bone was 0.897 and for nerve, 0.827. The Dice score for bone was 0.945, and for nerve, it was 0.905. There were no significant differences in the quantified Kambin triangle or safe triangle between manually segmented images and automatically segmented images ( P > .05).

          CONCLUSIONS:

          Deep learning–based automatic segmentation of lumbosacral structures (nerves and bone) on routine CT is feasible, and SPINECT-based 3D reconstruction of safe and Kambin triangles is also validated.

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          Author and article information

          Journal
          AJNR Am J Neuroradiol
          AJNR Am J Neuroradiol
          ajnr
          ajnr
          AJNR
          AJNR: American Journal of Neuroradiology
          American Society of Neuroradiology
          0195-6108
          1936-959X
          June 2019
          : 40
          : 6
          : 1074-1081
          Affiliations
          [1] aFrom the Orthopedic Department, Shanghai Tenth People's Hospital (G.F., C.F., D.W., S.H.), Tongji University School of Medicine, Shanghai, China
          [2] bDepartment of Spine Surgery (G.F.), Third Affiliated Hospital of Sun Yatsen University, Guangzhou, China
          [3] cSurgical Planning Lab (G.F., J.L., W.M.W.), Radiology Department, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts
          [4] dSpinal Pain Research Institute of Tongji University (H.L., C.F., D.W., S.H.), Shanghai, China
          [5] eSchool of Data and Computer Science (Z.W.), Sun Yat-sen University, Guangzhou, China
          [6] fShanghai Jiao Tong University School of Medicine (Y.L.), Shanghai, China
          [7] gGraduate School of Frontier Sciences (J.L.), University of Tokyo, Tokyo, Japan.
          Author notes

          G. Fan and H. Liu contributed equally to the study.

          Please address correspondence to Shisheng He, MD, and Guoxin Fan, MD, 301 Yanchang Rd, Shanghai 200072, China; e-mail: tjhss7418@ 123456tongji.edu.cn , gfan@ 123456tongji.edu.cn
          Author information
          https://orcid.org/0000-0002-6418-8343
          https://orcid.org/0000-0001-7492-9275
          https://orcid.org/0000-0003-4878-9509
          https://orcid.org/0000-0001-7365-7490
          https://orcid.org/0000-0002-2737-573X
          https://orcid.org/0000-0001-5143-3947
          https://orcid.org/0000-0002-1437-2214
          https://orcid.org/0000-0002-4279-8634
          https://orcid.org/0000-0001-7796-1510
          Article
          PMC6746413 PMC6746413 6746413 18-01341
          10.3174/ajnr.A6070
          6746413
          31147353
          ff4363aa-1d27-4903-ad62-36712a215523
          © 2019 by American Journal of Neuroradiology

          Indicates open access to non-subscribers at www.ajnr.org

          History
          : 14 January 2019
          : 16 April 2019
          Funding
          Funded by: National Institutes of Health , open-funder-registry 10.13039/100000002;
          Award ID: P41EB015898
          Funded by: Shanghai Hospital Development Center , open-funder-registry 10.13039/501100008750;
          Award ID: 16CR3017A
          Funded by: China Scholarship Council , open-funder-registry 10.13039/501100004543;
          Award ID: 201706260169
          Categories
          Spine

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