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      Parallel 2D FFT implementation on FPGA suitable for real-time MR image processing

      research-article
      1 , a) , 1,2
      The Review of Scientific Instruments
      AIP Publishing LLC

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          Abstract

          We report the design and implementation of a parallel two-dimensional fast Fourier transform (2D FFT) algorithm on a Field Programmable Gate Array (FPGA) for real-time MR image processing. Although a number of architectures of 2D FFT hardware processors have been reported, these generic processors or IP cores are not always effective for processing MRI data. The key feature of our design is that our processors are customized solely for real-time MRI applications. We demonstrate that by considering the unique features of real-time MRI data streams, we were able to develop and implement the 2D FFT processors that are resource-efficient and flexible enough to handle both regular and irregular data. Using a data-driven approach, we were able to simplify the inter-processor data communication while maintaining data synchronization without a synchronous clock signal bus and complex interconnection network. We experimentally verified our designs by processing multi-slice image data sets with 128 × 128 and 256 × 256 in-plane resolution. The results demonstrate the effectiveness of our 2D FFT processors and show that image reconstruction can be accelerated in proportion to the parallel processing factor. We achieved image-reconstruction processing rates up to 3000 and 800 slices per second for images with 128 × 128 and 256 × 256 in-plane resolution, respectively. The results also indicate that the image-reconstruction acceleration is primarily limited by the speed of the data transfer between the FPGA device and external sensors.

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          Author and article information

          Contributors
          Journal
          Rev Sci Instrum
          Rev Sci Instrum
          RSINAK
          The Review of Scientific Instruments
          AIP Publishing LLC
          0034-6748
          1089-7623
          September 2018
          21 September 2018
          : 89
          : 9
          : 093706
          Affiliations
          [1 ] Center for Basic MR Research, NorthShore University HealthSystem Research Institute , 1033 University Place Suite 100, Evanston, Illinois 60201, USA
          [2 ] Department of Biomedical Engineering, Northwestern University , Evanston, Illinois 60208, USA
          Author notes
          [a) ]Author to whom correspondence should be addressed: lli@ 123456northshore.org . Tel.: (224) 364-1405. FAX: (847)492-0731.
          Author information
          http://orcid.org/0000-0003-0781-0594
          Article
          PMC6150773 PMC6150773 6150773 054809RSI 1.5019846 A172442RR
          10.1063/1.5019846
          6150773
          30278692
          89e526f8-b202-4c8e-acbd-a85766f8037a
          Copyright © 2018 Author(s)

          Published by AIP Publishing.

          0034-6748/2018/89(9)/093706/9/ $30.00

          History
          : 17 December 2017
          : 04 September 2018
          Page count
          Pages: 9
          Funding
          Funded by: National Institute of Biomedical Imaging and Bioengineering http://dx.doi.org/10.13039/100000070
          Award ID: R21EB024852
          Categories
          ARTICLES
          Microscopy and Imaging
          Custom metadata

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