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      Genome Sequence of a Small RNA Virus of the Southern Corn Rootworm, Diabrotica undecimpunctata howardi Barber (Coleoptera: Chrysomelidae)

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          Abstract

          The genome sequence of a novel small RNA virus, tentatively named Diabrotica undecimpunctata virus 1 (DuV1), was discovered from the transcriptome of the southern corn rootworm, Diabrotica undecimpunctata howardi Barber. DuV1 has a positive-sense, single-stranded RNA genome that encodes a single polyprotein of 3,401 amino acids with limited similarity to other viruses.

          ABSTRACT

          The genome sequence of a novel small RNA virus, tentatively named Diabrotica undecimpunctata virus 1 (DuV1), was discovered from the transcriptome of the southern corn rootworm, Diabrotica undecimpunctata howardi Barber. DuV1 has a positive-sense, single-stranded RNA genome that encodes a single polyprotein of 3,401 amino acids with limited similarity to other viruses.

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          Genome Sequence of the First Coleopteran Iflavirus Isolated from Western Corn Rootworm, Diabrotica virgifera virgifera LeConte

          Sijun Liu, Yuting Chen, Thomas W Sappington … (2017)
          ABSTRACT The genome sequence of a novel iflavirus was identified from the transcriptome of the western corn rootworm, Diabrotica virgifera virgifera. The RNA sequence consists of 9,823 nucleotides (nt) with a 3′ polyadenylated tail, containing a single open reading frame that encodes a 3,028-amino-acid polyprotein.
          Article 0 comments Cited 9 times – based on 0 reviews     Review now
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            Genome Sequence of Diabrotica virgifera virgifera virus 2, a Novel Small RNA Virus of the Western Corn Rootworm, Diabrotica virgifera virgifera LeConte

            Sijun Liu, Yuting Chen, Thomas W Sappington … (2017)
            ABSTRACT The genome of a novel small RNA virus, tentatively named Diabrotica virgifera virgifera virus 2 (DvvV2), was identified in the western corn rootworm, Diabrotica virgifera virgifera LeConte, through transcriptome sequencing and confirmed by reverse transcription-PCR. Here, we report the near-complete nucleotide sequence and the genome organization of DvvV2.
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              Genome Sequence of a Novel Positive-Sense, Single-Stranded RNA Virus Isolated from Western Corn Rootworm, Diabrotica virgifera virgifera LeConte

              Sijun Liu, Yuting Chen, Thomas W Sappington … (2017)
              ABSTRACT The genome sequence of a novel small RNA virus was assembled from the transcriptome of the western corn rootworm, Diabrotica virgifera virgifera. The assembled genome has 13,182 nucleotides with a 3′ polyadenylated tail. Two open reading frames are predicted to encode polyproteins of 2,838 and 1,073 amino acids.
              Article 0 comments Cited 5 times – based on 0 reviews     Review now
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                Author and article information

                Contributors
                Kenneth M. Stedman: Role: Editor
                Journal
                Journal ID (nlm-ta): Microbiol Resour Announc
                Journal ID (iso-abbrev): Microbiol Resour Announc
                Journal ID (hwp): ga
                Journal ID (pmc): mra
                Journal ID (publisher-id): MRA
                Title: Microbiology Resource Announcements
                Publisher: American Society for Microbiology (1752 N St., N.W., Washington, DC )
                ISSN (Electronic): 2576-098X
                Publication date (Electronic): 25 June 2020
                Publication date Collection: June 2020
                Volume: 9
                Issue: 26
                Electronic Location Identifier: e00379-20
                Affiliations
                [a ]Department of Entomology, Iowa State University, Ames, Iowa, USA
                [b ]Departamento de Producción Agropecuaria, Universidad de Caldas, Manizales, Colombia
                [c ]Department of Entomology, University of Nebraska—Lincoln, Lincoln, Nebraska, USA
                [d ]Department of Entomology and Nematology, University of Florida, Gainesville, Florida, USA
                Portland State University
                Author notes
                Address correspondence to Bryony C. Bonning, bbonning@ 123456ufl.edu .

                Citation Liu S, Valencia-Jiménez A, Darlington M, Vélez AM, Bonning BC. 2020. Genome sequence of a small RNA virus of the southern corn rootworm, Diabrotica undecimpunctata howardi Barber (Coleoptera: Chrysomelidae). Microbiol Resour Announc 9:e00379-20. https://doi.org/10.1128/MRA.00379-20.

                Author information
                https://orcid.org/0000-0002-9956-9613
                Article
                Publisher ID: MRA00379-20
                DOI: 10.1128/MRA.00379-20
                PMC ID: 7317097
                PubMed ID: 32586857
                SO-VID: 1585777c-d3ec-4003-8639-8a9f62d4559a
                Copyright © Copyright © 2020 Liu et al.
                License:

                This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license.

                History
                Date received : 10 April 2020
                Date accepted : 28 May 2020
                Page count
                Figures: 1, Tables: 0, Equations: 0, References: 9, Pages: 3, Words: 1479
                Categories
                Subject: Genome Sequences
                Custom metadata
                cover-date June 2020

                Data availability:

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