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      Viruses and bacteria in acute asthma exacerbations – A GA 2LEN‐DARE* systematic review

      review-article
      1 , 1 , 2 , 3 , 4 , 5 , 6 , 7 , 8 , 9 , 10 , 11 , 10 , 12 , 9 , 13 , 14 , 5 , 15 , 16 , 17 , 1 , 8 , 18 , 12 , 15 , 19 , 20 , 21 , 22 , 23 , 19 , 24 , 25 , 1 , 26 , 27 , 28 , 29 , 11 , 13 , 11 , 1 , 1 , 30
      Allergy
      Blackwell Publishing Ltd
      asthma exacerbation, atypical bacteria, detection method, PCR, respiratory virus

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          Abstract

          To cite this article: Papadopoulos NG, Christodoulou I, Rohde G, Agache I, Almqvist C, Bruno A, Bonini S, Bont L, Bossios A, Bousquet J, Braido F, Brusselle G, Canonica GW, Carlsen KH, Chanez P, Fokkens WJ, Garcia‐Garcia M, Gjomarkaj M, Haahtela T, Holgate ST, Johnston SL, Konstantinou G, Kowalski M, Lewandowska‐Polak A, Lødrup‐Carlsen K, Mäkelä M, Malkusova I, Mullol J, Nieto A, Eller E, Ozdemir C, Panzner P, Popov T, Psarras S, Roumpedaki E, Rukhadze M, Stipic‐Markovic A, Todo Bom A, Toskala E, van Cauwenberge P, van Drunen C, Watelet JB, Xatzipsalti M, Xepapadaki P, Zuberbier T. Viruses and bacteria in acute asthma exacerbations – A GA 2LEN‐DARE systematic review. Allergy 2011; 66: 458–468.

          Abstract

          A major part of the burden of asthma is caused by acute exacerbations. Exacerbations have been strongly and consistently associated with respiratory infections. Respiratory viruses and bacteria are therefore possible treatment targets. To have a reasonable estimate of the burden of disease induced by such infectious agents on asthmatic patients, it is necessary to understand their nature and be able to identify them in clinical samples by employing accurate and sensitive methodologies. This systematic review summarizes current knowledge and developments in infection epidemiology of acute asthma in children and adults, describing the known impact for each individual agent and highlighting knowledge gaps. Among infectious agents, human rhinoviruses are the most prevalent in regard to asthma exacerbations. The newly identified type‐C rhinoviruses may prove to be particularly relevant. Respiratory syncytial virus and metapneumovirus are important in infants, while influenza viruses seem to induce severe exacerbations mostly in adults. Other agents are relatively less or not clearly associated. Mycoplasma and Chlamydophila pneumoniae seem to be involved more with asthma persistence rather than with disease exacerbations. Recent data suggest that common bacteria may also be involved, but this should be confirmed. Although current information is considerable, improvements in detection methodologies, as well as the wide variation in respect to location, time and populations, underline the need for additional studies that should also take into account interacting factors.

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          Most cited references90

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          A newly discovered human pneumovirus isolated from young children with respiratory tract disease

          From 28 young children in the Netherlands, we isolated a paramyxovirus that was identified as a tentative new member of the Metapneumovirus genus based on virological data, sequence homology and gene constellation. Previously, avian pneumovirus was the sole member of this recently assigned genus, hence the provisional name for the newly discovered virus: human metapneumovirus. The clinical symptoms of the children from whom the virus was isolated were similar to those caused by human respiratory syncytial virus infection, ranging from upper respiratory tract disease to severe bronchiolitis and pneumonia. Serological studies showed that by the age of five years, virtually all children in the Netherlands have been exposed to human metapneumovirus and that the virus has been circulating in humans for at least 50 years.
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            Cloning of a human parvovirus by molecular screening of respiratory tract samples.

            The identification of new virus species is a key issue for the study of infectious disease but is technically very difficult. We developed a system for large-scale molecular virus screening of clinical samples based on host DNA depletion, random PCR amplification, large-scale sequencing, and bioinformatics. The technology was applied to pooled human respiratory tract samples. The first experiments detected seven human virus species without the use of any specific reagent. Among the detected viruses were one coronavirus and one parvovirus, both of which were at that time uncharacterized. The parvovirus, provisionally named human bocavirus, was in a retrospective clinical study detected in 17 additional patients and associated with lower respiratory tract infections in children. The molecular virus screening procedure provides a general culture-independent solution to the problem of detecting unknown virus species in single or pooled samples. We suggest that a systematic exploration of the viruses that infect humans, "the human virome," can be initiated.
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              Isolation of a common receptor for Coxsackie B viruses and adenoviruses 2 and 5.

              A complementary DNA clone has been isolated that encodes a coxsackievirus and adenovirus receptor (CAR). When transfected with CAR complementary DNA, nonpermissive hamster cells became susceptible to coxsackie B virus attachment and infection. Furthermore, consistent with previous studies demonstrating that adenovirus infection depends on attachment of a viral fiber to the target cell, CAR-transfected hamster cells bound adenovirus in a fiber-dependent fashion and showed a 100-fold increase in susceptibility to virus-mediated gene transfer. Identification of CAR as a receptor for these two unrelated and structurally distinct viral pathogens is important for understanding viral pathogenesis and has implications for therapeutic gene delivery with adenovirus vectors.
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                Author and article information

                Journal
                Allergy
                Allergy
                10.1111/(ISSN)1398-9995
                ALL
                Allergy
                Blackwell Publishing Ltd (Oxford, UK )
                0105-4538
                1398-9995
                18 November 2010
                April 2011
                : 66
                : 4 ( doiID: 10.1111/all.2011.66.issue-4 )
                : 458-468
                Affiliations
                [ 1 ]Allergy Department, 2nd Pediatric Clinic, National and Kapodistrian University, Athens, Greece
                [ 2 ]Department of Respiratory Medicine, Maastricht University Medical Center, Maastricht, the Netherlands
                [ 3 ]Department of Allergy and Clinical Immunology, Transylvania University, Brasov, Romania
                [ 4 ]Department of Medical Epidemiology and Biostatistics, Karolinska Institutet, Stockholm Sweden
                [ 5 ]Istituto di Biomedicina, Consiglio Nazionale delle Ricerche, Palermo, Italy
                [ 6 ]Consiglio Nazionale delle Recerche, Rome, Italy
                [ 7 ]Pediatric Infectious Diseases and Immunology University Medical Center, Utrecht
                [ 8 ]Krefting Research Centre, Sahlgrenska Academy, University of Gothenburg, Sweden
                [ 9 ]University Hospital, Montpellier, France
                [ 10 ]Allergy and Respiratory Department, University of Genoa, Genoa, Italy
                [ 11 ]Department of Otorhinolaryngology, Ghent University Hospital, Gent, Belgium
                [ 12 ]Oslo University Hospital, Rikshospitalet, Norway
                [ 13 ]Department of Otorhinolarygology, Academic Medical Centre, Amsterdam, The Netherlands
                [ 14 ]Pediatrics Department, Severo Ochoa Hospital, Madrid, Spain
                [ 15 ]Department of Allergy, Skin and Allergy Hospital, Helsinki University Hospital, Finland
                [ 16 ]Respiratory Cell and Molecular Biology Research Division, University of Southampton, UK
                [ 17 ]Imperial College London, National Heart and Lung Institute, UK
                [ 18 ]Department of Immunology, Medical University of Łódź, Rheumatology and Allergy, Łódź, Poland
                [ 19 ]Department of Allergology and Immunology, Medical Faculty of the Charles Universit, Pilsen, Czech Republic
                [ 20 ]ENT Department, Hospital Clínic – IDIBAPS, CIBERES, Barcelona, Catalonia, Spain
                [ 21 ]Pediatric Allergy Unit, Children’s Hospital La Fe, Valencia, Spain
                [ 22 ]Department of Dermatology, Odense University Hospital, Odense, Denmark
                [ 23 ]Marmara University Medical Faculty, Division of Pediatric Allergy and Immunology, Istanbul, Turkey
                [ 24 ]Medical University, Clinical Centre of Allergology of the Alexandrovska Hospital, Sofia, Bulgaria
                [ 25 ]Biomedical Research Foundation, Academy of Athens, Greece
                [ 26 ]Centre of Allergy and Immunology, Tbilisi, Georgia
                [ 27 ]Department of Clinical Immunology, Pulmonology and Rheumatology, Sveti Duh General Hospital, Zagreb, Croatia
                [ 28 ]Coimbra University, Coimbra, Portugal
                [ 29 ]Finnish Institute of Occupational Health, Helsinki, Finland
                [ 30 ]Department of Dermatology and Allergy, Allergy Centre Charité, Berlin, Germany
                Author notes
                [*]Nikolaos G. Papadopoulos, Allergy Research Centre, 2nd Pediatric Clinic, University of Athens, 41,Fidippidou str., 11527 Athens, Greece.
Tel.: +30 210 7776964
Fax: +30 210 7777693
E‐mail: ngp@ 123456allergy.gr
                [‡]

                Professor Nikolaos Papadopoulos has received the Phadia Allergy Research Forum (PhARF) Award 2010 for his work on viruses and asthma.

                Article
                ALL2505
                10.1111/j.1398-9995.2010.02505.x
                7159474
                21087215
                2d5dde39-3d8a-4836-95d2-a1d9a438a147
                © 2010 John Wiley & Sons A/S

                This article is being made freely available through PubMed Central as part of the COVID-19 public health emergency response. It can be used for unrestricted research re-use and analysis in any form or by any means with acknowledgement of the original source, for the duration of the public health emergency.

                History
                : 13 October 2010
                Page count
                Figures: 0, Tables: 2, Pages: 11
                Categories
                Review Articles
                Custom metadata
                2.0
                April 2011
                Converter:WILEY_ML3GV2_TO_JATSPMC version:5.8.0 mode:remove_FC converted:15.04.2020

                Immunology
                asthma exacerbation,atypical bacteria,detection method,pcr,respiratory virus
                Immunology
                asthma exacerbation, atypical bacteria, detection method, pcr, respiratory virus

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