14
views
0
recommends
+1 Recommend
0 collections
    0
    shares
      • Record: found
      • Abstract: found
      • Article: found
      Is Open Access

      Light-focusing human micro-lenses generated from pluripotent stem cells model lens development and drug-induced cataract in vitro

      research-article

      Read this article at

      Bookmark
          There is no author summary for this article yet. Authors can add summaries to their articles on ScienceOpen to make them more accessible to a non-specialist audience.

          ABSTRACT

          Cataracts cause vision loss and blindness by impairing the ability of the ocular lens to focus light onto the retina. Various cataract risk factors have been identified, including drug treatments, age, smoking and diabetes. However, the molecular events responsible for these different forms of cataract are ill-defined, and the advent of modern cataract surgery in the 1960s virtually eliminated access to human lenses for research. Here, we demonstrate large-scale production of light-focusing human micro-lenses from spheroidal masses of human lens epithelial cells purified from differentiating pluripotent stem cells. The purified lens cells and micro-lenses display similar morphology, cellular arrangement, mRNA expression and protein expression to human lens cells and lenses. Exposing the micro-lenses to the emergent cystic fibrosis drug Vx-770 reduces micro-lens transparency and focusing ability. These human micro-lenses provide a powerful and large-scale platform for defining molecular disease mechanisms caused by cataract risk factors, for anti-cataract drug screening and for clinically relevant toxicity assays.

          Abstract

          [Related article:] Highlighted Article: Using human pluripotent stem cells, robust and reliable methods are described for large-scale production of purified human lens epithelial cells, and for subsequent large-scale generation of clinically relevant, light-focusing micro-lenses.

          Related collections

          Most cited references44

          • Record: found
          • Abstract: found
          • Article: found
          Is Open Access

          featureCounts: An efficient general-purpose program for assigning sequence reads to genomic features

          , , (2013)
          Next-generation sequencing technologies generate millions of short sequence reads, which are usually aligned to a reference genome. In many applications, the key information required for downstream analysis is the number of reads mapping to each genomic feature, for example to each exon or each gene. The process of counting reads is called read summarization. Read summarization is required for a great variety of genomic analyses but has so far received relatively little attention in the literature. We present featureCounts, a read summarization program suitable for counting reads generated from either RNA or genomic DNA sequencing experiments. featureCounts implements highly efficient chromosome hashing and feature blocking techniques. It is considerably faster than existing methods (by an order of magnitude for gene-level summarization) and requires far less computer memory. It works with either single or paired-end reads and provides a wide range of options appropriate for different sequencing applications. featureCounts is available under GNU General Public License as part of the Subread (http://subread.sourceforge.net) or Rsubread (http://www.bioconductor.org) software packages.
            Bookmark
            • Record: found
            • Abstract: found
            • Article: found
            Is Open Access

            CIDR: Ultrafast and accurate clustering through imputation for single-cell RNA-seq data

            Most existing dimensionality reduction and clustering packages for single-cell RNA-seq (scRNA-seq) data deal with dropouts by heavy modeling and computational machinery. Here, we introduce CIDR (Clustering through Imputation and Dimensionality Reduction), an ultrafast algorithm that uses a novel yet very simple implicit imputation approach to alleviate the impact of dropouts in scRNA-seq data in a principled manner. Using a range of simulated and real data, we show that CIDR improves the standard principal component analysis and outperforms the state-of-the-art methods, namely t-SNE, ZIFA, and RaceID, in terms of clustering accuracy. CIDR typically completes within seconds when processing a data set of hundreds of cells and minutes for a data set of thousands of cells. CIDR can be downloaded at https://github.com/VCCRI/CIDR. Electronic supplementary material The online version of this article (doi:10.1186/s13059-017-1188-0) contains supplementary material, which is available to authorized users.
              Bookmark
              • Record: found
              • Abstract: found
              • Article: not found

              Lanosterol reverses protein aggregation in cataracts.

              The human lens is comprised largely of crystallin proteins assembled into a highly ordered, interactive macro-structure essential for lens transparency and refractive index. Any disruption of intra- or inter-protein interactions will alter this delicate structure, exposing hydrophobic surfaces, with consequent protein aggregation and cataract formation. Cataracts are the most common cause of blindness worldwide, affecting tens of millions of people, and currently the only treatment is surgical removal of cataractous lenses. The precise mechanisms by which lens proteins both prevent aggregation and maintain lens transparency are largely unknown. Lanosterol is an amphipathic molecule enriched in the lens. It is synthesized by lanosterol synthase (LSS) in a key cyclization reaction of a cholesterol synthesis pathway. Here we identify two distinct homozygous LSS missense mutations (W581R and G588S) in two families with extensive congenital cataracts. Both of these mutations affect highly conserved amino acid residues and impair key catalytic functions of LSS. Engineered expression of wild-type, but not mutant, LSS prevents intracellular protein aggregation of various cataract-causing mutant crystallins. Treatment by lanosterol, but not cholesterol, significantly decreased preformed protein aggregates both in vitro and in cell-transfection experiments. We further show that lanosterol treatment could reduce cataract severity and increase transparency in dissected rabbit cataractous lenses in vitro and cataract severity in vivo in dogs. Our study identifies lanosterol as a key molecule in the prevention of lens protein aggregation and points to a novel strategy for cataract prevention and treatment.
                Bookmark

                Author and article information

                Journal
                Development
                Development
                DEV
                develop
                Development (Cambridge, England)
                The Company of Biologists Ltd
                0950-1991
                1477-9129
                1 January 2018
                1 January 2018
                : 145
                : 1
                : dev155838
                Affiliations
                [1 ]School of Medicine, Western Sydney University , Campbelltown, NSW 2560, Australia
                [2 ]Medical Sciences Research Group, Western Sydney University , Campbelltown, NSW 2560, Australia
                [3 ]Victor Chang Cardiac Research Institute , Darlinghurst, NSW 2010, Australia
                [4 ]St Vincent's Clinical School, University of New South Wales , Sydney, NSW 2010, Australia
                [5 ]Electron Microscopy Laboratory, NSW Health Pathology and Correlative Microscopy Facility, Ingham Institute , Liverpool, NSW 2170, Australia
                Author notes
                [*]

                These authors contributed equally to this work

                []Author for correspondence ( m.oconnor@ 123456westernsydney.edu.au )
                Author information
                http://orcid.org/0000-0002-4883-1706
                Article
                DEV155838
                10.1242/dev.155838
                5825866
                29217756
                4b65abac-dfcd-49bb-91de-35eda345fdf8
                © 2018. Published by The Company of Biologists Ltd

                This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( http://creativecommons.org/licenses/by/3.0), which permits unrestricted use, distribution and reproduction in any medium provided that the original work is properly attributed.

                History
                : 8 June 2017
                : 15 November 2017
                Funding
                Funded by: Medical Advances Without Animals Trust, http://dx.doi.org/10.13039/501100001220;
                Funded by: Rebecca L. Cooper Medical Research Foundation, http://dx.doi.org/10.13039/501100001061;
                Funded by: National Health and Medical Research Council;
                Funded by: National Heart Foundation of Australia, http://dx.doi.org/10.13039/501100001030;
                Categories
                210
                203
                Human Development

                Developmental biology
                lens development,stem cell,organoid,focus,cataract,vx-770
                Developmental biology
                lens development, stem cell, organoid, focus, cataract, vx-770

                Comments

                Comment on this article