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      Circadian Clock-Controlled Checkpoints in the Pathogenesis of Complex Disease

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          Abstract

          The circadian clock coordinates physiology, metabolism, and behavior with the 24-h cycles of environmental light. Fundamental mechanisms of how the circadian clock regulates organ physiology and metabolism have been elucidated at a rapid speed in the past two decades. Here we review circadian networks in more than six organ systems associated with complex disease, which cluster around metabolic disorders, and seek to propose critical regulatory molecules controlled by the circadian clock (named clock-controlled checkpoints) in the pathogenesis of complex disease. These include clock-controlled checkpoints such as circadian nuclear receptors in liver and muscle tissues, chemokines and adhesion molecules in the vasculature. Although the progress is encouraging, many gaps in the mechanisms remain unaddressed. Future studies should focus on devising time-dependent strategies for drug delivery and engagement in well-characterized organs such as the liver, and elucidating fundamental circadian biology in so far less characterized organ systems, including the heart, blood, peripheral neurons, and reproductive systems.

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          Most cited references249

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          Mechanisms of NAFLD development and therapeutic strategies

          There has been a rise in the prevalence of nonalcoholic fatty liver disease (NAFLD), paralleling a worldwide increase in diabetes and metabolic syndrome. NAFLD, a continuum of liver abnormalities from nonalcoholic fatty liver (NAFL) to nonalcoholic steatohepatitis (NASH), has a variable course but can lead to cirrhosis and liver cancer. Here we review the pathogenic and clinical features of NAFLD, its major comorbidities, clinical progression and risk of complications and in vitro and animal models of NAFLD enabling refinement of therapeutic targets that can accelerate drug development. We also discuss evolving principles of clinical trial design to evaluate drug efficacy and the emerging targets for drug development that involve either single agents or combination therapies intended to arrest or reverse disease progression.
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            Transcriptional architecture of the mammalian circadian clock

            Next-generation sequencing approaches have yielded new insights into circadian function. Here, Takahashi reviews genome-wide analyses of the clock transcriptional feedback loop in mammals, which reveal a global circadian regulation of transcription factor occupancy, RNA polymerase II recruitment and initiation, nascent transcription and chromatin remodelling.
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              Inflammation, metaflammation and immunometabolic disorders

              Proper regulation and management of energy, substrate diversity and quantity, as well as macromolecular synthesis and breakdown processes, are fundamental to cellular and organismal survival and are paramount to health. Cellular and multicellular organization are defended by the immune response, a robust and critical system
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                Author and article information

                Contributors
                Journal
                Front Genet
                Front Genet
                Front. Genet.
                Frontiers in Genetics
                Frontiers Media S.A.
                1664-8021
                07 September 2021
                2021
                : 12
                : 721231
                Affiliations
                [1] 1Department of Cardiology and the Center for Circadian Metabolism and Cardiovascular Disease, Southwest Hospital, Third Military Medical University (Army Medical University) , Chongqing, China
                [2] 2Medical Center of Hematology, The Xinqiao Hospital of Army Medical University , Chongqing, China
                [3] 3Department of Anesthesiology, The Second Affiliated Hospital, Chongqing Medical University , Chongqing, China
                [4] 4Department of Obstetrics and Gynaecology, The First Affiliated Hospital of Chongqing Medical University , Chongqing, China
                [5] 5Department of Obstetrics and Gynaecology, The Second Affiliated Hospital of Chongqing Medical University , Chongqing, China
                [6] 6Key Lab of Medical Protection for Electromagnetic Radiation, Ministry of Education of China, Institute of Toxicology, College of Preventive Medicine, Army Medical University (Third Military Medical University) , Chongqing, China
                [7] 7Research Center for Nutrition and Food Safety, Institute of Military Preventive Medicine, Army Medical University , Chongqing, China
                [8] 8Key Laboratory of Extreme Environmental Medicine, Department of Pathophysiology, College of High Altitude Military Medicine, Ministry of Education of China, Army Medical University (Third Military Medical University) , Chongqing, China
                [9] 9Key Laboratory of High Altitude Medicine, PLA, Army Medical University (Third Military Medical University) , Chongqing, China
                [10] 10Department of Dermatology, The First Affiliated Hospital of Chongqing Medical University , Chongqing, China
                Author notes

                Edited by: Guang-Zhong Wang, Shanghai Institute of Nutrition and Health, Shanghai Institutes for Biological Sciences (CAS), China

                Reviewed by: Qingchun Tong, University of Texas Health Science Center at Houston, United States; Luoying Zhang, Huazhong University of Science and Technology, China

                *Correspondence: Min-Dian Li, mindianli@ 123456tmmu.edu.cn

                These authors share first authorship

                This article was submitted to Human and Medical Genomics, a section of the journal Frontiers in Genetics

                Article
                10.3389/fgene.2021.721231
                8452875
                34557221
                4b9c1e48-e921-41b8-ad1e-041e20f754fd
                Copyright © 2021 Li, Xin, Yuan, Yang, Li, Tian, Zhang, Zhang, Han, Chen, Duan, Ju, Chen, Deng, He and Biological Rhythm Academic Consortium in Chongqing (BRACQ).

                This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

                History
                : 06 June 2021
                : 16 August 2021
                Page count
                Figures: 7, Tables: 0, Equations: 0, References: 249, Pages: 22, Words: 22211
                Categories
                Genetics
                Review

                Genetics
                circadian clock,complex disease,checkpoint,nr1d1/rev-erbα,melatonin,circadian rhythm,diabetes complications,systems biology

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