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      Impact of Long Noncoding RNA LINC00673 Genetic Variants on Susceptibility to Diabetic Retinopathy

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          Abstract

          Long noncoding RNAs (lncRNAs) have been proven to play critical roles in diabetic retinopathy (DR). This study investigated whether the single nucleotide polymorphism (SNP) of long intergenic noncoding RNA 00673 ( LINC00673) affects the clinical characteristics of diabetic retinopathy (DR). A total of three loci of LINC00673 SNPs (rs6501551, rs9914618, and rs11655237) were genotyped using TaqMan allelic discrimination in 276 and 454 individuals with and without DR, respectively. Our results revealed that LINC00673 SNP rs11655237 CT genotype (AOR: 1.592, 95% CI: 1.059–2.395, p = 0.026), CT + TT genotype (AOR: 1.255, 95% CI: 1.029–1.531, p = 0.025), and allele T (AOR: 1.185, 95% CI: 1.004–1.397, p = 0.044) yielded higher ratios in the non-proliferative diabetic retinopathy (NPDR) subgroup than in the non-DR group. Furthermore, the interval of diabetes mellitus (DM) was significantly shorter in the LINC00673 SNP rs11655237 CT + TT variant than that in the LINC00673 SNP rs11655237 wild type (10.44 ± 7.10 vs. 12.98 ± 8.34, p = 0.009). In conclusion, the LINC00673 SNP rs11655237 T allele is associated with a higher probability of NPDR development. Patients with the LINC00673 SNP rs11655237 CT + TT variant exhibited a short DM interval.

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          Most cited references47

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          Global aetiology and epidemiology of type 2 diabetes mellitus and its complications

          Globally, the number of people with diabetes mellitus has quadrupled in the past three decades, and diabetes mellitus is the ninth major cause of death. About 1 in 11 adults worldwide now have diabetes mellitus, 90% of whom have type 2 diabetes mellitus (T2DM). Asia is a major area of the rapidly emerging T2DM global epidemic, with China and India the top two epicentres. Although genetic predisposition partly determines individual susceptibility to T2DM, an unhealthy diet and a sedentary lifestyle are important drivers of the current global epidemic; early developmental factors (such as intrauterine exposures) also have a role in susceptibility to T2DM later in life. Many cases of T2DM could be prevented with lifestyle changes, including maintaining a healthy body weight, consuming a healthy diet, staying physically active, not smoking and drinking alcohol in moderation. Most patients with T2DM have at least one complication, and cardiovascular complications are the leading cause of morbidity and mortality in these patients. This Review provides an updated view of the global epidemiology of T2DM, as well as dietary, lifestyle and other risk factors for T2DM and its complications.
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            Global causes of blindness and distance vision impairment 1990-2020: a systematic review and meta-analysis.

            Contemporary data for causes of vision impairment and blindness form an important basis of recommendations in public health policies. Refreshment of the Global Vision Database with recently published data sources permitted modelling of cause of vision loss data from 1990 to 2015, further disaggregation by cause, and forecasts to 2020.
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              LncRNA-mediated regulation of cell signaling in cancer

              To date, a large number of long non-coding RNAs (lncRNAs) have been recently discovered through functional genomics studies. Importantly, lncRNAs have been shown, in many cases, to function as master regulators for gene expression and thus, they can play a critical role in various biological functions and disease processes including cancer. Although the lncRNA-mediated gene expression involves various mechanisms, such as regulation of transcription, translation, protein modification, and the formation of RNA-protein or protein-protein complexes, in this review we discuss the latest developments primarily in important cell signaling pathways regulated by lncRNAs in cancer.
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                Author and article information

                Contributors
                Journal
                Front Genet
                Front Genet
                Front. Genet.
                Frontiers in Genetics
                Frontiers Media S.A.
                1664-8021
                25 April 2022
                2022
                : 13
                : 889530
                Affiliations
                [1] 1 Institute of Medicine , Chung Shan Medical University , Taichung, Taiwan
                [2] 2 Department of Ophthalmology , Changhua Christian Hospital , Changhua, Taiwan
                [3] 3 School of Medicine , Chung Shan Medical University , Taichung, Taiwan
                [4] 4 Department of Internal Medicine , Division of Endocrinology and Metabolism , Chung Shan Medical University Hospital , Taichung, Taiwan
                [5] 5 Department of Ophthalmology , Chung Shan Medical University Hospital , Taichung, Taiwan
                [6] 6 Department of Ophthalmology , Nobel Eye Institute , Taipei, Taiwan
                [7] 7 Department of Medical Research , Chung Shan Medical University Hospital , Taichung, Taiwan
                Author notes

                Edited by: Yen-Wei Chu, National Chung Hsing University, Taiwan

                Reviewed by: Leyi Wei, Shandong University, China

                Xing-Hua Liao, Wuhan University of Science and Technology, China

                *Correspondence: Shun-Fa Yang, ysf@ 123456csmu.edu.tw

                This article was submitted to Computational Genomics, a section of the journal Frontiers in Genetics

                Article
                889530
                10.3389/fgene.2022.889530
                9081725
                35547254
                60728e4e-3dda-4d9a-899f-5b77aff145fd
                Copyright © 2022 Chuang, Yang, Kornelius, Huang, Hsu, Lee and Yang.

                This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

                History
                : 04 March 2022
                : 24 March 2022
                Categories
                Genetics
                Original Research

                Genetics
                long intergenic noncoding rna 00673,polymorphism,diabetic retinopathy,diabetes mellitus,disease duration

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