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      Complete mitochondrial genome of Tringa erythropus (Charadriiformes: Scolopacidae)

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      Author(s): a , b , a , b , a , b
      Publication date (Electronic, pub):
      Publication date (Electronic, collection):
      Journal: Mitochondrial DNA. Part B, Resources
      Publisher: Taylor & Francis
      Keywords: Spotted redshank, Tringa erythropus, complete mitochondrial genome, gene arrangement

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          Abstract

          The spotted redshank Tringa erythropus is a shorebird in the large bird family Scolopacidae. In this study, we sequenced and characterized its complete mitochondrial genome. The mitogenome is a circular DNA molecule of 16,683 bp in length, containing 13 protein-coding genes, 22 tRNA, 2 rRNA genes, and an AT-rich region. Its gene arrangement pattern is identical with typical bird species. Based on our data combined with the mitgenome DNA sequences of 12 Scolopacidae birds from GenBank, phylogenetic analysis indicated that T. erythropus, Arenaria interpres, and Eurynorhynchus pygmeus formed a group.

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          Genetic aspects of mitochondrial genome evolution.

          Peter Stadler, Matthias Bernt, Anke Braband … (2013)
          Many years of extensive studies of metazoan mitochondrial genomes have established differences in gene arrangements and genetic codes as valuable phylogenetic markers. Understanding the underlying mechanisms of replication, transcription and the role of the control regions which cause e.g. different gene orders is important to assess the phylogenetic signal of such events. This review summarises and discusses, for the Metazoa, the general aspects of mitochondrial transcription and replication with respect to control regions as well as several proposed models of gene rearrangements. As whole genome sequencing projects accumulate, more and more observations about mitochondrial gene transfer to the nucleus are reported. Thus occurrence and phylogenetic aspects concerning nuclear mitochondrial-like sequences (NUMTS) is another aspect of this review. Copyright © 2012 Elsevier Inc. All rights reserved.
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            The complete mitochondrial genome of the black-headed gull Chroicocephalus ridibundus (Charadriiformes: Laridae)

            Y DONG, L ZHOU, B. LI … (2016)
            Article 0 comments Cited 2 times – based on 0 reviews     Review now
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              Complete mitochondrial genome of the South Polar Skua Stercorarius maccormicki (Charadriiformes, Stercorariidae) in Antarctica.

              Yeong-Deok Han, Ye-Seul Baek, Jeong-Hoon Kim … (2016)
              The South Polar Skua, gull-like seabirds is the most fascinating Antarctic seabirds that lay two eggs at sites free of snow and ice and predominantly hunt pelagic fish and penguins. Blood samples of the South Polar Skua Stercorarius maccormicki was collected during the summer activity near King Sejong station in Antarctica. The complete mitochondrial DNA sequence of S. maccormicki was 16,669 bp, showing conserved genome structure and orientation found in other avian species. The control region of S. maccormicki was 93- and 80 bp shorter compared to those of Chroicocephalus saundersi and Synthliboramphus antiquus respectively. Interestingly, there is a (CAACAAACAA)6 repeat sequence in the control region. Our results of S. maccormicki mt genome including the repeat sequence, may provide useful genetic information for phylogenetic and phylogeographic histories of the southern skua complex.
              Article 0 comments Cited 2 times – based on 0 reviews     Review now
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                Author and article information

                Journal
                Journal ID (nlm-ta): Mitochondrial DNA B Resour
                Journal ID (iso-abbrev): Mitochondrial DNA B Resour
                Title: Mitochondrial DNA. Part B, Resources
                Publisher: Taylor & Francis
                ISSN (Electronic): 2380-2359
                Publication date (Electronic, pub): 3 September 2016
                Publication date (Electronic, collection): 2016
                Volume: 1
                Issue: 1
                Pages: 678-679
                Affiliations
                [a ]School of Resources and Environmental Engineering, Anhui University , Hefei, China;
                [b ]Anhui Biodiversity Information Center , Hefei, China
                Author notes
                CONTACT Lizhi Zhou zhoulz@ 123456ahu.edu.cn School of Resources and Environmental Engineering, Anhui University , 111 Jiulong Road, Hefei230601, China
                Article
                Publisher ID: 1219637
                DOI: 10.1080/23802359.2016.1219637
                PMC ID: 7799656
                PubMed ID: 33473595
                SO-VID: 8f56ec27-a16a-48cb-b3c8-7de161ac2962
                Copyright © © 2016 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.
                License:

                This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

                History
                Page count
                Figures: 1, Pages: 2
                Categories
                Subject: Research Article
                Subject: Mitogenome Announcement

                Keywords: spotted redshank,tringa erythropus,complete mitochondrial genome,gene arrangement
                Data availability:
                Keywords: spotted redshank, tringa erythropus, complete mitochondrial genome, gene arrangement

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