Quynh Thi Nguyen: Role: Data curationRole: Formal analysisRole: InvestigationRole: SoftwareRole: ValidationRole:
VisualizationRole: Writing – original draft
Azumi Ishizaki: Role: ConceptualizationRole: Data curationRole: Formal analysisRole: InvestigationRole:
MethodologyRole: ResourcesRole: SoftwareRole: VisualizationRole: Writing – original
draft
Xiuqiong Bi: Role: Data curationRole: InvestigationRole: MethodologyRole: SoftwareRole: ValidationRole:
VisualizationRole: Writing – review & editing
Kazunori Matsuda:
ORCID: https://orcid.org/0000-0002-5242-6332
Role: Data curationRole: Formal analysisRole: InvestigationRole: MethodologyRole:
SoftwareRole: ValidationRole: Writing – review & editing
Lam Van Nguyen: Role: Data curationRole: ResourcesRole: Writing – review & editing
Hung Viet Pham: Role: Data curationRole: InvestigationRole: MethodologyRole: ResourcesRole: Writing
– review & editing
Chung Thi Thu Phan: Role: Data curationRole: InvestigationRole: ResourcesRole: Writing – review & editing
Thuy Thi Bich Phung: Role: MethodologyRole: ValidationRole: Writing – review & editing
Tuyen Thi Thu Ngo: Role: Data curationRole: Project administrationRole: ResourcesRole: Writing – review
& editing
An Van Nguyen: Role: ResourcesRole: SoftwareRole: ValidationRole: Writing – review & editing
Dung Thi Khanh Khu: Role: Project administrationRole: ResourcesRole: Writing – review & editing
Hiroshi Ichimura:
ORCID: https://orcid.org/0000-0003-4478-1964
Role: ConceptualizationRole: Funding acquisitionRole: Project administrationRole:
SupervisionRole: ValidationRole: Writing – review & editing
Jennifer Manuzak: Role: Editor
Journal ID (nlm-ta): PLoS One
Journal ID (iso-abbrev): PLoS One
Journal ID (publisher-id): plos
Title:
PLoS ONE
Publisher:
Public Library of Science
(San Francisco, CA USA
)
ISSN
(Electronic):
1932-6203
Publication date
(Electronic):
11
October
2021
Publication date Collection: 2021
Volume: 16
Issue: 10
Electronic Location Identifier: e0258226
Affiliations
[1
]
Department of Viral infection and International Health, Graduate school of Medical
Science, Kanazawa University, Kanazawa, Japan
[2
]
Yakult Central Institute, Tokyo, Japan
[3
]
Vietnam National Children’s Hospital, Hanoi, Viet Nam
Tulane National Primate Research Center, UNITED STATES
Author notes
Competing Interests: The authors have declared that no competing interests exist.
Author information
Article
Publisher ID:
PONE-D-21-16737
DOI: 10.1371/journal.pone.0258226
PMC ID: 8504761
PubMed ID: 34634074
SO-VID: bbf69d9b-91cd-4b1c-ae08-beee43d87010
Copyright © © 2021 Nguyen et al
License:
This is an open access article distributed under the terms of the
Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided
the original author and source are credited.
Funded by:
Ministry of Education, Culture, Sports, Science and Technology (JP)
Award ID: The Program of Founding Research Centers for Emerging and Reemerging Infectious Disease;
grant number 23406013
Award Recipient
:
ORCID: https://orcid.org/0000-0003-4478-1964
Hiroshi Ichimura
Funded by:
Kanazawa University (JP)
Award ID: President Strategic Research Fund
Award Recipient
:
Azumi Ishizaki
This study was supported, in part, by the Ministry of Education, Culture, Sports,
Science, and Technology (MEXT) in Japan (the Program of Founding Research Centers
for Emerging and Reemerging Infectious Disease; grant number 23406013,
https://www.mext.go.jp/en/publication/whitepaper/title03/detail03/sdetail03/sdetail03/1372928.htm) and the Kanazawa University President Strategic Research Fund (
https://www.kanazawa-u.ac.jp/research_bulletin/contact.html). The funders had no role in study design, data collection and analysis, decision
to publish, or preparation of the manuscript.
Subject:
Research Article
Subject:
Biology and Life Sciences
Subject:
Organisms
Subject:
Bacteria
Subject:
Gut Bacteria
Subject:
Biology and Life Sciences
Subject:
Microbiology
Subject:
Medical Microbiology
Subject:
Microbial Pathogens
Subject:
Viral Pathogens
Subject:
Immunodeficiency Viruses
Subject:
HIV
Subject:
Medicine and Health Sciences
Subject:
Pathology and Laboratory Medicine
Subject:
Pathogens
Subject:
Microbial Pathogens
Subject:
Viral Pathogens
Subject:
Immunodeficiency Viruses
Subject:
HIV
Subject:
Biology and Life Sciences
Subject:
Organisms
Subject:
Viruses
Subject:
Viral Pathogens
Subject:
Immunodeficiency Viruses
Subject:
HIV
Subject:
Biology and Life Sciences
Subject:
Organisms
Subject:
Viruses
Subject:
Immunodeficiency Viruses
Subject:
HIV
Subject:
Biology and life sciences
Subject:
Organisms
Subject:
Viruses
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RNA viruses
Subject:
Retroviruses
Subject:
Lentivirus
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HIV
Subject:
Biology and Life Sciences
Subject:
Microbiology
Subject:
Medical Microbiology
Subject:
Microbial Pathogens
Subject:
Viral Pathogens
Subject:
Retroviruses
Subject:
Lentivirus
Subject:
HIV
Subject:
Medicine and Health Sciences
Subject:
Pathology and Laboratory Medicine
Subject:
Pathogens
Subject:
Microbial Pathogens
Subject:
Viral Pathogens
Subject:
Retroviruses
Subject:
Lentivirus
Subject:
HIV
Subject:
Biology and Life Sciences
Subject:
Organisms
Subject:
Viruses
Subject:
Viral Pathogens
Subject:
Retroviruses
Subject:
Lentivirus
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HIV
Subject:
Medicine and health sciences
Subject:
Medical conditions
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Infectious diseases
Subject:
Viral diseases
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HIV infections
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Biology and Life Sciences
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Organisms
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Bacteria
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Gut Bacteria
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Clostridium Perfringens
Subject:
Research and Analysis Methods
Subject:
Mathematical and Statistical Techniques
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Statistical Methods
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Regression Analysis
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Linear Regression Analysis
Subject:
Physical Sciences
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Mathematics
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Statistics
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Statistical Methods
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Regression Analysis
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Linear Regression Analysis
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Biology and Life Sciences
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Organisms
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Bacteria
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Staphylococcus
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Biology and Life Sciences
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Microbiology
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Medical Microbiology
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Microbial Pathogens
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Bacterial Pathogens
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Staphylococcus
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Medicine and Health Sciences
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Pathology and Laboratory Medicine
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Pathogens
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Microbial Pathogens
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Bacterial Pathogens
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Staphylococcus
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Biology and Life Sciences
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Immunology
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Vaccination and Immunization
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Antiviral Therapy
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Antiretroviral Therapy
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Medicine and Health Sciences
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Immunology
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Vaccination and Immunization
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Antiviral Therapy
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Antiretroviral Therapy
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Medicine and Health Sciences
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Public and Occupational Health
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Preventive Medicine
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Vaccination and Immunization
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Antiviral Therapy
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Antiretroviral Therapy
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Biology and Life Sciences
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Organisms
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Bacteria