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      IRSp53 promotes postsynaptic density formation and actin filament bundling

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          Abstract

          IRSp53 is abundantly expressed at the postsynaptic densities of neuronal synapses, but its action mechanism has been poorly understood. Feng et al. demonstrate that IRSp53 is a key scaffold linker for the PSD core and pallium via promoting phase separation of the PSD assembly, and they also uncover a direct role of IRSp53 in actin modulation essential for dendritic spine development.

          Abstract

          IRSp53 (aka BAIAP2) is a scaffold protein that couples membranes with the cytoskeleton in actin-filled protrusions such as filopodia and lamellipodia. The protein is abundantly expressed in excitatory synapses and is essential for synapse development and synaptic plasticity, although with poorly understood mechanisms. Here we show that specific multivalent interactions between IRSp53 and its binding partners PSD-95 or Shank3 drive phase separation of the complexes in solution. IRSp53 can be enriched to the reconstituted excitatory PSD (ePSD) condensates via bridging to the core and deeper layers of ePSD. Overexpression of a mutant defective in the IRSp53/PSD-95 interaction perturbs synaptic enrichment of IRSp53 in mouse cortical neurons. The reconstituted PSD condensates promote bundled actin filament formation both in solution and on membranes, via IRSp53-mediated actin binding and bundling. Overexpression of mutants that perturb IRSp53–actin interaction leads to defects in synaptic maturation of cortical neurons. Together, our studies provide potential mechanistic insights into the physiological roles of IRSp53 in synapse formation and function.

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          Most cited references59

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          Shank, a novel family of postsynaptic density proteins that binds to the NMDA receptor/PSD-95/GKAP complex and cortactin.

          NMDA receptors are linked to intracellular cytoskeletal and signaling molecules via the PSD-95 protein complex. We report a novel family of postsynaptic density (PSD) proteins, termed Shank, that binds via its PDZ domain to the C terminus of PSD-95-associated protein GKAP. A ternary complex of Shank/GKAP/PSD-95 assembles in heterologous cells and can be coimmunoprecipitated from rat brain. Synaptic localization of Shank in neurons is inhibited by a GKAP splice variant that lacks the Shank-binding C terminus. In addition to its PDZ domain, Shank contains a proline-rich region that binds to cortactin and a SAM domain that mediates multimerization. Shank may function as a scaffold protein in the PSD, potentially cross-linking NMDA receptor/PSD-95 complexes and coupling them to regulators of the actin cytoskeleton.
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            The postsynaptic architecture of excitatory synapses: a more quantitative view.

            Excitatory (glutamatergic) synapses in the mammalian brain are usually situated on dendritic spines, a postsynaptic microcompartment that also harbors organelles involved in protein synthesis, membrane trafficking, and calcium metabolism. The postsynaptic membrane contains a high concentration of glutamate receptors, associated signaling proteins, and cytoskeletal elements, all assembled by a variety of scaffold proteins into an organized structure called the postsynaptic density (PSD). A complex machine made of hundreds of distinct proteins, the PSD dynamically changes its structure and composition during development and in response to synaptic activity. The molecular size of the PSD and the stoichiometry of many major constituents have been recently measured. The structures of some intact PSD proteins, as well as the spatial arrangement of several proteins within the PSD, have been determined at low resolution by electron microscopy. On the basis of such studies, a more quantitative and geometrically realistic view of PSD architecture is emerging.
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              Structure-stability-function relationships of dendritic spines.

              Dendritic spines, which receive most of the excitatory synaptic input in the cerebral cortex, are heterogeneous with regard to their structure, stability and function. Spines with large heads are stable, express large numbers of AMPA-type glutamate receptors, and contribute to strong synaptic connections. By contrast, spines with small heads are motile and unstable and contribute to weak or silent synaptic connections. Their structure-stability-function relationships suggest that large and small spines are "memory spines" and "learning spines", respectively. Given that turnover of glutamate receptors is rapid, spine structure and the underlying organization of the actin cytoskeleton are likely to be major determinants of fast synaptic transmission and, therefore, are likely to provide a physical basis for memory in cortical neuronal networks. Characterization of supramolecular complexes responsible for synaptic memory and learning is key to the understanding of brain function and disease.
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                Author and article information

                Journal
                J Cell Biol
                J Cell Biol
                jcb
                The Journal of Cell Biology
                Rockefeller University Press
                0021-9525
                1540-8140
                01 August 2022
                12 July 2022
                : 221
                : 8
                : e202105035
                Affiliations
                [1 ] Division of Life Science, State Key Laboratory of Molecular Neuroscience, Hong Kong University of Science and Technology, Hong Kong, China
                [2 ] State Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University, Shanghai, China
                [3 ] Center for Synaptic Brain Dysfunctions, Institute for Basic Science (IBS), Daejeon, Korea
                [4 ] Department of Biological Sciences, Korea Advanced Institute of Science and Technology (KAIST), Daejeon, Korea
                [5 ] School of Life Sciences, Southern University of Science and Technology, Shenzhen, China
                Author notes
                Correspondence to Eunjoon Kim: kime@ 123456kaist.ac.kr
                [*]

                lead contact

                Author information
                https://orcid.org/0000-0002-2862-6625
                https://orcid.org/0000-0002-9754-1051
                https://orcid.org/0000-0001-5518-6584
                https://orcid.org/0000-0001-9404-0190
                Article
                jcb.202105035
                10.1083/jcb.202105035
                9280192
                35819332
                c4d19150-5038-4f60-9cd0-4ac07baa727d
                © 2022 Feng et al.

                This article is distributed under the terms of an Attribution–Noncommercial–Share Alike–No Mirror Sites license for the first six months after the publication date (see http://www.rupress.org/terms/). After six months it is available under a Creative Commons License (Attribution–Noncommercial–Share Alike 4.0 International license, as described at https://creativecommons.org/licenses/by-nc-sa/4.0/).

                History
                : 07 May 2021
                : 04 November 2021
                : 13 June 2022
                Funding
                Funded by: Ministry of Science and Technology of China;
                Award ID: 2019YFA0508402
                Funded by: National Natural Science Foundation of China, DOI http://dx.doi.org/10.13039/501100001809;
                Award ID: 82188101
                Funded by: RGC of Hong Kong;
                Award ID: AoE-M09-12
                Award ID: 16104518
                Award ID: 16101419
                Funded by: Human Frontier Science Program, DOI http://dx.doi.org/10.13039/100004412;
                Award ID: RGP0020/2019
                Funded by: Institute of Basic Science;
                Award ID: IBS-R002-D1
                Funded by: General Research Fund of RGC;
                Award ID: 16102120
                Funded by: Hong Kong University of Science and Technology, DOI http://dx.doi.org/10.13039/501100005950;
                Categories
                Article
                Cell Signaling
                Neuroscience

                Cell biology
                Cell biology

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