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      Concerted ESCRT and clathrin recruitment waves define the timing and morphology of intraluminal vesicle formation

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          Abstract

          The endosomal sorting complex required for transport (ESCRT) machinery mediates cargo sorting, membrane deformation and membrane scission on the surface of endosomes, generating intraluminal vesicles (ILVs) to degrade signaling receptors. By live-cell imaging of individual endosomes in human cells, we find that ESCRT proteins are recruited in a repetitive pattern: ESCRT-0 and -I show a gradual and linear recruitment and dissociation, whereas ESCRT-III and its regulatory ATPase VPS4 display fast and transient dynamics. Electron microscopy shows that ILVs are formed consecutively, starting immediately after endocytic uptake of cargo proteins and correlating with the repeated ESCRT recruitment waves, unraveling the timing of ILV formation. Clathrin, recruited by ESCRT-0, is required for timely ESCRT-0 dissociation, efficient ILV formation, correct ILV size and cargo degradation. Thus, cargo sorting and ILV formation occur by concerted, coordinated and repetitive recruitment waves of individual ESCRT subcomplexes and are controlled by clathrin.

          Abstract

          Intraluminal vesicles are formed by the endosomal sorting complex required for transport (ESCRT) machinery. Here, the authors unravel the timing of vesicle budding, and that endosomal clathrin regulates concerted recruitment of ESCRT subcomplexes, required for efficient membrane remodeling.

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          Most cited references46

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          The ESCRT machinery in endosomal sorting of ubiquitylated membrane proteins.

          Selective trafficking of membrane proteins to lysosomes for destruction is required for proper cell signalling and metabolism. Ubiquitylation aids this process by specifying which proteins should be transported to the lysosome lumen by the multivesicular endosome pathway. The endosomal sorting complex required for transport (ESCRT) machinery sorts cargo labelled with ubiquitin into invaginations of endosome membranes. Then, through a highly conserved mechanism also used in cytokinesis and viral budding, it mediates the breaking off of the cargo-containing intraluminal vesicles from the perimeter membrane. The involvement of the ESCRT machinery in suppressing diseases such as cancer, neurodegeneration and infections underscores its importance to the cell.
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            Molecular Mechanism of Multivesicular Body Biogenesis by ESCRT Complexes

            When internalized receptors and other cargo are destined for lysosomal degradation, they are ubiquitinated and sorted by the ESCRT complexes 0, I, II, and III into multivesicular bodies. Multivesicular bodies are formed when cargo-rich patches of the limiting membrane of endosomes bud inward by an unknown mechanism and are then cleaved to yield cargo-bearing intralumenal vesicles. The biogenesis of multivesicular bodies was reconstituted and visualized using giant unilamellar vesicles, fluorescent ESCRT-0, I, II, and III complexes, and a membrane-tethered fluorescent ubiquitin fusion as a model cargo. ESCRT-0 forms domains of clustered cargo but does not deform membranes. ESCRT-I and II in combination deform the membrane into buds, in which cargo is confined. ESCRT-I and II localize to the bud necks, and recruit ESCRT-0-ubiquitin domains to the buds. ESCRT-III subunits localize to the bud neck and efficiently cleave the buds to form intralumenal vesicles. Intralumenal vesicles produced in this reaction contain the model cargo but are devoid of ESCRTs. The observations explain how the ESCRTs direct membrane budding and scission from the cytoplasmic side of the bud without being consumed in the reaction.
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              Receptor downregulation and multivesicular-body sorting.

              The sorting of proteins into the inner vesicles of multivesicular bodies is required for many key cellular processes, which range from the downregulation of activated signalling receptors to the proper stimulation of the immune response. Recent advances in our understanding of the multivesicular-body sorting pathway have resulted from the identification of ubiquitin as a signal for the efficient sorting of proteins into this transport route, and from the discovery of components of the sorting and regulatory machinery that directs this complex process.
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                Author and article information

                Contributors
                eva.wenzel@medisin.uio.no
                camilla.raiborg@rr-research.no
                Journal
                Nat Commun
                Nat Commun
                Nature Communications
                Nature Publishing Group UK (London )
                2041-1723
                26 July 2018
                26 July 2018
                2018
                : 9
                : 2932
                Affiliations
                [1 ]ISNI 0000 0004 0389 8485, GRID grid.55325.34, Department of Molecular Cell Biology, Institute for Cancer Research, , Oslo University Hospital, Montebello, ; N-0379 Oslo, Norway
                [2 ]ISNI 0000 0004 1936 8921, GRID grid.5510.1, Centre for Cancer Cell Reprogramming, Institute of Clinical Medicine, Faculty of Medicine, , University of Oslo, ; N-0316 Oslo, Norway
                [3 ]ISNI 0000 0004 1936 8921, GRID grid.5510.1, Department of Mathematics, , University of Oslo, ; N-0316 Oslo, Norway
                Author information
                http://orcid.org/0000-0002-5561-3344
                http://orcid.org/0000-0002-5903-4059
                http://orcid.org/0000-0002-3068-9983
                http://orcid.org/0000-0002-5406-5403
                Article
                5345
                10.1038/s41467-018-05345-8
                6062606
                30050131
                ca02c534-2dd0-4697-af21-b38518d5b938
                © The Author(s) 2018

                Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

                History
                : 9 December 2017
                : 29 June 2018
                Funding
                Funded by: The South-Eastern Norway Regional Health Authority, Grant Number 2015014
                Funded by: The Norwegian Cancer Society, Grant number 6834441
                Funded by: The Research Council of Norway, Grant number 263056
                Funded by: The Research Council of Norway, Grant number 262652
                Funded by: The Norwegian Cancer Society, Grant number 4541899
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