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      SUMOylation inhibitor TAK-981 (subasumstat) synergizes with 5-azacytidine in preclinical models of acute myeloid leukemia

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          Abstract

          Acute myeloid leukemias (AML) are severe hematomalignancies with dismal prognosis. The post-translational modification SUMOylation plays key roles in leukemogenesis and AML response to therapies. Here, we show that TAK-981 (subasumstat), a first-in-class SUMOylation inhibitor, is endowed with potent anti-leukemic activity in various preclinical models of AML. TAK-981 targets AML cell lines and patient blast cells in vitro and in vivo in xenografted mice with minimal toxicity on normal hematopoietic cells. Moreover, it synergizes with 5-azacytidine (AZA), a DNA-hypomethylating agent now used in combination with the BCL-2 inhibitor venetoclax to treat AML patients unfit for standard chemotherapies. Interestingly, TAK-981+AZA combination shows higher anti-leukemic activity than AZA+venetoclax combination both in vitro and in vivo, at least in the models tested. Mechanistically, TAK-981 potentiates the transcriptional reprogramming induced by AZA, promoting apoptosis, alteration of the cell cycle and differentiation of the leukemic cells. In addition, TAK-981+AZA treatment induces many genes linked to inflammation and immune response pathways. In particular, this leads to the secretion of type-I interferon by AML cells. Finally, TAK-981+AZA induces the expression of natural killer-activating ligands (MICA/B) and adhesion proteins (ICAM-1) at the surface of AML cells. Consistently, TAK-981+AZA-treated AML cells activate natural killer cells and increase their cytotoxic activity. Targeting SUMOylation with TAK-981 may thus be a promising strategy to both sensitize AML cells to AZA and reduce their immune-escape capacities.

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          Most cited references57

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          Azacitidine and Venetoclax in Previously Untreated Acute Myeloid Leukemia

          Older patients with acute myeloid leukemia (AML) have a dismal prognosis, even after treatment with a hypomethylating agent. Azacitidine added to venetoclax had promising efficacy in a previous phase 1b study.
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            Venetoclax combined with decitabine or azacitidine in treatment-naive, elderly patients with acute myeloid leukemia

            Older patients with acute myeloid leukemia (AML) respond poorly to standard induction therapy. B-cell lymphoma 2 (BCL-2) overexpression is implicated in survival of AML cells and treatment resistance. We report safety and efficacy of venetoclax with decitabine or azacitidine from a large, multicenter, phase 1b dose-escalation and expansion study. Patients (N = 145) were at least 65 years old with treatment-naive AML and were ineligible for intensive chemotherapy. During dose escalation, oral venetoclax was administered at 400, 800, or 1200 mg daily in combination with either decitabine (20 mg/m2, days 1-5, intravenously [IV]) or azacitidine (75 mg/m2, days 1-7, IV or subcutaneously). In the expansion, 400 or 800 mg venetoclax with either hypomethylating agent (HMA) was given. Median age was 74 years, with poor-risk cytogenetics in 49% of patients. Common adverse events (>30%) included nausea, diarrhea, constipation, febrile neutropenia, fatigue, hypokalemia, decreased appetite, and decreased white blood cell count. No tumor lysis syndrome was observed. With a median time on study of 8.9 months, 67% of patients (all doses) achieved complete remission (CR) + CR with incomplete count recovery (CRi), with a CR + CRi rate of 73% in the venetoclax 400 mg + HMA cohort. Patients with poor-risk cytogenetics and those at least 75 years old had CR + CRi rates of 60% and 65%, respectively. The median duration of CR + CRi (all patients) was 11.3 months, and median overall survival (mOS) was 17.5 months; mOS has not been reached for the 400-mg venetoclax cohort. The novel combination of venetoclax with decitabine or azacitidine was effective and well tolerated in elderly patients with AML (This trial was registered at www.clinicaltrials.gov as #NCT02203773).
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              Inhibiting DNA Methylation Causes an Interferon Response in Cancer via dsRNA Including Endogenous Retroviruses.

              We show that DNA methyltransferase inhibitors (DNMTis) upregulate immune signaling in cancer through the viral defense pathway. In ovarian cancer (OC), DNMTis trigger cytosolic sensing of double-stranded RNA (dsRNA) causing a type I interferon response and apoptosis. Knocking down dsRNA sensors TLR3 and MAVS reduces this response 2-fold and blocking interferon beta or its receptor abrogates it. Upregulation of hypermethylated endogenous retrovirus (ERV) genes accompanies the response and ERV overexpression activates the response. Basal levels of ERV and viral defense gene expression significantly correlate in primary OC and the latter signature separates primary samples for multiple tumor types from The Cancer Genome Atlas into low versus high expression groups. In melanoma patients treated with an immune checkpoint therapy, high viral defense signature expression in tumors significantly associates with durable clinical response and DNMTi treatment sensitizes to anti-CTLA4 therapy in a pre-clinical melanoma model.
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                Author and article information

                Journal
                Haematologica
                Haematologica
                HAEMA
                Haematologica
                Fondazione Ferrata Storti
                0390-6078
                1592-8721
                24 August 2023
                01 January 2024
                : 109
                : 1
                : 98-114
                Affiliations
                [1 ]IGMM, University of Montpellier , CNRS
                [2 ]Service d’Hématologie Clinique, CHU de Montpellier
                [3 ]MGX, University of Montpellier , CNRS, INSERM, Montpellier, France
                Author notes
                *LG and MDT contributed equally as first authors

                Disclosures

                TAK-981 was obtained from Takeda Development Center Americas, Inc. GC is a consultant for Roche and BMS-Celgene; is a member of the advisory boards of MabQi, Ownards Therapeutics, MedXcell and receives honoraria from Abbvie, Sanofi, Gilead, Janssen, Roche, BMS-Celgene, Takeda Pharmaceuticals. The remaining authors have no conflicts of interest to disclose.

                Contributions

                LG designed and performed the experiments on cell lines, patient cells and mouse models. MDT conceived and performed in vivo experiments. MC prepared samples for RNA-sequencing and performed qPCR. DA, MA and GiB analyzed viability and differentiation of AML cell lines. RH participated in PBMC and NK purifications. MA, RH and DA performed validation qPCR. AD prepared RNA-sequencing libraries and sequenced them. CRZ performed microbead-based assay. GC provided patient samples. DT conceived and analyzed RNA-sequencing experiments and performed GSEA analysis. MP provided funding for the study. GB supervised the study and provided funding. LG, MDT, DT, MP and GB wrote the manuscript.

                Data-sharing statement

                The RNA-sequencing data are available on Gene Expression Omnibus with accession number GSE212330. All other data are presented in the main text or the Online Supplementary Appendix.

                Article
                10.3324/haematol.2023.282704
                10772526
                37608777
                d9f0c07f-973f-4ec7-8232-4d985d559b99
                Copyright© 2024 Ferrata Storti Foundation

                This article is distributed under the terms of the Creative Commons Attribution Noncommercial License ( by-nc 4.0) which permits any noncommercial use, distribution, and reproduction in any medium, provided the original author(s) and source are credited.

                History
                : 06 January 2023
                : 16 August 2023
                Page count
                Figures: 8, Tables: 0, Equations: 0, References: 58, Pages: 17
                Funding
                Funding: Funding was provided by the CNRS, the Ligue Nationale contre le Cancer (to DA, MC, MP), the Fondation pour la Recherche Médicale (contract FDM201906008566, LG), INCa_16072, the Fédération Leucémie Espoir, the Association Laurette Fugain, the Fondation ARC pour la recherche sur le cancer and the Agence Nationale pour la Recherche (“Investissements d’avenir” program; ANR-16-IDEX-0006; project SUMOLAM). The HEMODIAG_2020 collection was funded by the Montpellier University Hospital, the Montpellier SIRIC and the Languedoc Roussillon Region. MGX acknowledges financial support from the France Génomique National infrastructure, funded as part of “Investissements d’Avenir” program managed by the Agence Nationale pour la Recherche (contract ANR 10 INBS 09).
                Categories
                Article - Acute Myeloid Leukemia

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