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      Antimicrobial resistance profile of Staphylococcus aureus isolated from patients with infection at Tikur Anbessa Specialized Hospital, Addis Ababa, Ethiopia

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          Abstract

          Background

          Staphylococcus aureus is one of the major pathogens of public health importance responsible for various forms of infection. Development of resistance to commonly used antimicrobials limited treatment options against infections due to this pathogen. Antimicrobial resistance profile of Staphylococcus aureus isolated from patients with surgical site infection and ear infection and corresponding nasal swab was investigated in Tikur Anbessa Specialized Hospital (TASH), Addis Ababa, Ethiopia.

          Methods

          Wound and corresponding nasal swabs from patients with surgical site infection from general surgery ward ( n = 14), orthopedic ward ( n = 21) and those with otitis media ( n = 59) from Ear Nose and Throat (ENT) ward were cultured for S. aureus isolation according to standard procedures from December 2013 to June 2014. Isolates were investigated for susceptibility to panel of 17 antimicrobials using Kirby Bauer disc diffusion assay. Susceptibility to methicillin was phenotypically determined based on sensitivity of isolates to cefoxitin and oxacillin.

          Results

          A total of 79  S. aureus isolates were recovered from 54(57.4%) of patients. The isolates were resistant to ampicillin (100%), oxacillin and cefoxitin (68.4%, each), clindamycin (63.3%), cephalothin (59.5%), tetracycline (57%), sulfamethoxazole + trimethoprim and bacitracin (53.2%, each), and erythromycin (51.9%). Resistance to two or more antimicrobials was recorded in 74 (95%) of the isolates, while resistance to 3 or more antimicrobials was detected in 65(82.3%) of the isolates. Fifty-four (68.4%) of the isolates were methicillin resistant S. aureus (MRSA). Rate of occurrence of MRSA was more common among isolates from surgical wards ( p < 0.001) compared to those from ENT ward. High level of multi-drug resistance (MDR) was detected more commonly among isolates from orthopedic ward than those from general surgical ward and patients with ear infection (p < 0.001). One of the isolate cultured from wound swab of a patient with surgical site infection from orthopedic ward was resistant to all of the 17 antimicrobials tested.

          Conclusion

          S. aureus isolates from patients in TASH exhibited resistance to majority of antimicrobials commonly employed for the treatment of staphylococcal infections which calls for urgent need of prudent use of antimicrobials and the need for implementation of effective infection control practices to hamper spread of MDR S. aureus.

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          Most cited references20

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          A new class of genetic element, staphylococcus cassette chromosome mec, encodes methicillin resistance in Staphylococcus aureus.

          We have previously shown that the methicillin-resistance gene mecA of Staphylococcus aureus strain N315 is localized within a large (52-kb) DNA cassette (designated the staphylococcal cassette chromosome mec [SCCmec]) inserted in the chromosome. By sequence determination of the entire DNA, we identified two novel genes (designated cassette chromosome recombinase genes [ccrA and ccrB]) encoding polypeptides having a partial homology to recombinases of the invertase/resolvase family. The open reading frames were found to catalyze precise excision of the SCCmec from the methicillin-resistant S. aureus chromosome and site-specific as well as orientation-specific integration of the SCCmec into the S. aureus chromosome when introduced into the cells as a recombinant multicopy plasmid. We propose that SCCmec driven by a novel set of recombinases represents a new family of staphylococcal genomic elements.
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            Meticillin-resistant Staphylococcus aureus (MRSA): global epidemiology and harmonisation of typing methods.

            This article reviews recent findings on the global epidemiology of healthcare-acquired/associated (HA), community-acquired/associated (CA) and livestock-associated (LA) meticillin-resistant Staphylococcus aureus (MRSA) and aims to reach a consensus regarding the harmonisation of typing methods for MRSA. MRSA rates continue to increase rapidly in many regions and there is a dynamic spread of strains across the globe. HA-MRSA is currently endemic in hospitals in most regions. CA-MRSA clones have been spreading rapidly in the community and also infiltrating healthcare in many regions worldwide. To date, LA-MRSA is only prevalent in certain high-risk groups of workers in direct contact with live animals. CA-MRSA and LA-MRSA have become a challenge for countries that have so far maintained low rates of MRSA. These evolutionary changes have resulted in MRSA continuing to be a major threat to public health. Continuous efforts to understand the changing epidemiology of S. aureus infection in humans and animals are therefore necessary, not only for appropriate antimicrobial treatment and effective infection control but also to monitor the evolution of the species. The group made several consensus decisions with regard to harmonisation of typing methods. A stratified, three-level organisation of testing laboratories was proposed: local; regional; and national. The functions of, and testing methodology used by, each laboratory were defined. The group consensus was to recommend spa and staphylococcal cassette chromosome mec (SCCmec) typing as the preferred methods. Both are informative in defining particular strain characteristics and utilise standardised nomenclatures, making them applicable globally. Effective communication between each of the different levels and between national centres was viewed as being crucial to inform and monitor the molecular epidemiology of MRSA at national and international levels. Copyright © 2011 Elsevier B.V. and the International Society of Chemotherapy. All rights reserved.
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              Risk factors for surgical site infection.

              As many as 5% of patients undergoing surgery develop surgical site infections (SSIs), which may cause much morbidity and may sometimes be fatal. Treating SSIs imposes a substantial strain on the financial resources of the health care system. Review of current practice and guidelines. Important patient-related factors for SSI include existing infection, low serum albumin concentration, older age, obesity, smoking, diabetes mellitus, and ischemia secondary to vascular disease or irradiation. Surgical risk factors include prolonged procedures and inadequacies in either the surgical scrub or the antiseptic preparation of the skin. Physiological states that increase the risk of SSI include trauma, shock, blood transfusion, hypothermia, hypoxia, and hyperglycemia. Parameters that may be associated independently with an increased risk of SSI, and that may predict infection, include abdominal surgery, a contaminated or dirty operation, and more than three diagnoses at the time of discharge. The major sources of infection are microorganisms on the patient's skin and, less often, the alimentary tract or female genital tract. The organism most often isolated is Staphylococcus aureus, which often is resistant to methicillin. Antibiotic-resistant bacteria are a continuing and increasing problem. A wide range of patient-related, surgery-related, and physiological factors heighten the risk of SSI.
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                Author and article information

                Contributors
                silejetu@gmail.com
                haileale@yahoo.com
                kadmasen@gmail.com
                getadesse1@yahoo.com
                tesfu74@yahoo.com
                shibeshiworkineh@gmail.com
                tadesse.eguale@aau.edu.et
                Journal
                BMC Pharmacol Toxicol
                BMC Pharmacol Toxicol
                BMC Pharmacology & Toxicology
                BioMed Central (London )
                2050-6511
                21 May 2018
                21 May 2018
                2018
                : 19
                : 24
                Affiliations
                [1 ]Yekatit 12 Hospital Medical College, P.O. Box157, Addis Ababa, Ethiopia
                [2 ]ISNI 0000 0001 1250 5688, GRID grid.7123.7, Aklilu Lemma Institute of Pathobiology, , Addis Ababa University, ; P.O. Box 1176, Addis Ababa, Ethiopia
                [3 ]ISNI 0000 0001 1250 5688, GRID grid.7123.7, Department of Internal Medicine, School of Medicine, College of Health Sciences, , Addis Ababa University, ; Churchill Avenue, P.O.Box 9086, Addis Ababa, Ethiopia
                [4 ]ISNI 0000 0001 1250 5688, GRID grid.7123.7, Department of Biomedical Sciences, College of Veterinary medicine and Agriculture, , Addis Ababa University, ; P.O. Box 34, Debrezeit, Ethiopia
                [5 ]ISNI 0000 0001 1250 5688, GRID grid.7123.7, Institute of Biotechnology, College of natural and Computational sciences, , Addis Ababa University, ; P.O. Box, 1176, Addis Ababa, Ethiopia
                [6 ]ISNI 0000 0001 1250 5688, GRID grid.7123.7, Department of Pharmacology and Clinical Pharmacy, School of Pharmacy, College of Health Sciences, , Addis Ababa University, ; Churchill Avenue, P.O. Box 9086, Addis Ababa, Ethiopia
                Author information
                http://orcid.org/0000-0002-6686-2370
                Article
                210
                10.1186/s40360-018-0210-9
                5963020
                29784040
                de4c8550-61ee-4d03-af11-341f6c654d8c
                © The Author(s). 2018

                Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License ( http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver ( http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

                History
                : 18 September 2017
                : 26 April 2018
                Categories
                Research Article
                Custom metadata
                © The Author(s) 2018

                Toxicology
                staphylococcus aureus,methicillin resistant staphylococcus aureus,surgical site infection,drug resistance,otitis media

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