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      Thalidomide and its metabolite 5‐hydroxythalidomide induce teratogenicity via the cereblon neosubstrate PLZF

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          Abstract

          Thalidomide causes teratogenic effects by inducing protein degradation via cereblon (CRBN)‐containing ubiquitin ligase and modification of its substrate specificity. Human P450 cytochromes convert thalidomide into two monohydroxylated metabolites that are considered to contribute to thalidomide effects, through mechanisms that remain unclear. Here, we report that promyelocytic leukaemia zinc finger (PLZF)/ZBTB16 is a CRBN target protein whose degradation is involved in thalidomide‐ and 5‐hydroxythalidomide‐induced teratogenicity. Using a human transcription factor protein array produced in a wheat cell‐free protein synthesis system, PLZF was identified as a thalidomide‐dependent CRBN substrate. PLZF is degraded by the ubiquitin ligase CRL4 CRBN in complex with thalidomide, its derivatives or 5‐hydroxythalidomide in a manner dependent on the conserved first and third zinc finger domains of PLZF. Surprisingly, thalidomide and 5‐hydroxythalidomide confer distinctly different substrate specificities to mouse and chicken CRBN, and both compounds cause teratogenic phenotypes in chicken embryos. Consistently, knockdown of Plzf induces short bone formation in chicken limbs. Most importantly, degradation of PLZF protein, but not of the known thalidomide‐dependent CRBN substrate SALL4, was induced by thalidomide or 5‐hydroxythalidomide treatment in chicken embryos. Furthermore, PLZF overexpression partially rescued the thalidomide‐induced phenotypes. Our findings implicate PLZF as an important thalidomide‐induced CRBN neosubstrate involved in thalidomide teratogenicity.

          Abstract

          The vertebrate transcription factor PLZF/ZBTB16 emerges as potential key mediator of limb defects caused by CRBN ubiquitin ligase modulators, providing insight into the teratogenic contributions of thalidomide metabolites.

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          Lenalidomide causes selective degradation of IKZF1 and IKZF3 in multiple myeloma cells.

          Lenalidomide is a drug with clinical efficacy in multiple myeloma and other B cell neoplasms, but its mechanism of action is unknown. Using quantitative proteomics, we found that lenalidomide causes selective ubiquitination and degradation of two lymphoid transcription factors, IKZF1 and IKZF3, by the CRBN-CRL4 ubiquitin ligase. IKZF1 and IKZF3 are essential transcription factors in multiple myeloma. A single amino acid substitution of IKZF3 conferred resistance to lenalidomide-induced degradation and rescued lenalidomide-induced inhibition of cell growth. Similarly, we found that lenalidomide-induced interleukin-2 production in T cells is due to depletion of IKZF1 and IKZF3. These findings reveal a previously unknown mechanism of action for a therapeutic agent: alteration of the activity of an E3 ubiquitin ligase, leading to selective degradation of specific targets.
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            A series of normal stages in the development of the chick embryo.

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              The myeloma drug lenalidomide promotes the cereblon-dependent destruction of Ikaros proteins.

              Thalidomide-like drugs such as lenalidomide are clinically important treatments for multiple myeloma and show promise for other B cell malignancies. The biochemical mechanisms underlying their antitumor activity are unknown. Thalidomide was recently shown to bind to, and inhibit, the cereblon ubiquitin ligase. Cereblon loss in zebrafish causes fin defects reminiscent of the limb defects seen in children exposed to thalidomide in utero. Here we show that lenalidomide-bound cereblon acquires the ability to target for proteasomal degradation two specific B cell transcription factors, Ikaros family zinc finger proteins 1 and 3 (IKZF1 and IKZF3). Analysis of myeloma cell lines revealed that loss of IKZF1 and IKZF3 is both necessary and sufficient for lenalidomide's therapeutic effect, suggesting that the antitumor and teratogenic activities of thalidomide-like drugs are dissociable.
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                Author and article information

                Contributors
                sawasaki@ehime-u.ac.jp
                Journal
                EMBO J
                EMBO J
                10.1002/(ISSN)1460-2075
                EMBJ
                embojnl
                The EMBO Journal
                John Wiley and Sons Inc. (Hoboken )
                0261-4189
                1460-2075
                20 January 2021
                15 February 2021
                20 January 2021
                : 40
                : 4 ( doiID: 10.1002/embj.v40.4 )
                : e105375
                Affiliations
                [ 1 ] Division of Cell‐Free Sciences Proteo‐Science Center Ehime University Matsuyama Japan
                [ 2 ] Department of Ecological Developmental Adaptability Life Sciences Graduate School of Life Sciences Tohoku University Sendai Japan
                [ 3 ] Department of Nanopharmaceutical Sciences Nagoya Institute of Technology Nagoya Japan
                [ 4 ] Division of Proteo‐Drug‐Discovery Sciences Proteo‐Science Center Ehime University Matsuyama Japan
                [ 5 ] Avian Bioscience Research Center Graduate School of Bioagricultural Sciences Nagoya University Nagoya Japan
                [ 6 ]Present address: Department of Biology Faculty of Sciences Kyushu University Fukuoka Japan
                Author notes
                [*] [* ] Corresponding author. Tel: +81 89 927 8530; Fax: +81 89 927 9941; E‐mail: sawasaki@ 123456ehime-u.ac.jp

                Author information
                https://orcid.org/0000-0001-8825-7481
                https://orcid.org/0000-0003-0621-3798
                https://orcid.org/0000-0002-3742-4064
                https://orcid.org/0000-0002-7952-0556
                Article
                EMBJ2020105375
                10.15252/embj.2020105375
                7883055
                33470442
                df446d2b-c083-4fc1-8016-5e93eacdba7f
                © 2021 The Authors. Published under the terms of the CC BY NC ND 4.0 license

                This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.

                History
                : 22 April 2020
                : 17 November 2020
                : 30 November 2020
                Page count
                Figures: 16, Tables: 0, Pages: 25, Words: 28047
                Funding
                Funded by: Japan Agency for Medical Research and Development (AMED) , open-funder-registry 10.13039/100009619;
                Award ID: JP19am0101077
                Funded by: Takeda Science Foundation (公益財団法人 武田科学振興財団) , open-funder-registry 10.13039/100007449;
                Funded by: MEXT | Japan Society for the Promotion of Science (JSPS) , open-funder-registry 10.13039/501100001691;
                Award ID: JP16H06579
                Award ID: JP17J08477
                Award ID: JP16H04729
                Award ID: JP19H03218
                Award ID: JP17H06112
                Award ID: JP18H02446
                Award ID: JP18H04811
                Award ID: JP18H04756
                Award ID: JP20H05024
                Categories
                Article
                Articles
                Custom metadata
                2.0
                15 February 2021
                Converter:WILEY_ML3GV2_TO_JATSPMC version:5.9.7 mode:remove_FC converted:15.02.2021

                Molecular biology
                crbn,protein degradation,thalidomide metabolite,thalidomide teratogenicity,ubiquitin,development & differentiation,chemical biology,post-translational modifications, proteolysis & proteomics

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