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      Effect of inbreeding on the “Club Foot” disorder in Arabian Pureblood horses reared in Italy

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          Abstract

          Background:

          “The Club Foot” (or “Mismatched Foot”) is an acquired or congenital flexural deformity of the distal interphalangeal joint, caused by a shortening of the musculotendinous unit of the deep digital flexor tendon.

          Aim:

          The aim of this research was to detect the incidence of the disorder in Arabian Pureblood horses, attempting to understand its causes and to analyze a possible role of inbreeding in its expression. In this breed, in fact, the pathology is widespread because in the environment of origin, the rocky desert, a hard and almost goat’s hoof is not disabling so the selection against this disorder has never been done.

          Methods:

          Pedigrees were taken from 141 (reference population = RP) adult Arabian Pureblood horses (51 males and 90 females) belonging to eight Italian different farms during the period 1982–2017. For each horse, the presence or not of the disorder was observed and inbreeding coefficients ( F) was performed. Four grades of deformity were considered. Moreover, the environmental condition of each farm was considered: boxes, paddocks, nutrition, orientation, and hoof care and shoeing. The chi-square test was applied. Analysis of variance (ANOVA) was used to test the differences in the average inbreeding coefficient ( F) between affected and healthy animals, between sexes and between shod and unshod animals.

          Results:

          Two grades of deformity were observed (I and II) which give less severe manifestations, with 28 females and 25 males (37.59% of the examined horses) showing the disorder. No differences between males and females or between shod (38.29%) and unshod (61.70%) were observed. Environmental conditions do not influence the rate of pathology in the different farms, with a prevalence of the disorder ranging from 7.69% up to 100% on farm. The whole population (WP = RP and its genealogy) included 3,355 records subdivided in seven traced generations. One hundred and eighteen out of 141 horses (RP) were inbred (83.69%). The average inbreeding coefficient ( F) in the RP was 0.095. Inbreeding coefficient in RP was <0.05 in only 15 horses (12.71% of inbred), whereas it was >0.25 in 28 horses (23.73% of inbred).

          Conclusion:

          High inbreeding coefficients were observed in all farms and in particularly in affected animals suggesting that high inbreeding coefficients increases the probability that the disorder occurs. Future works may include the study of the hereditability of the character, and the attempt to identify loci associated with the disorder.

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          Most cited references29

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          Inbreeding depression on female fertility and calving ease in Spanish dairy cattle.

          Inbreeding depression on female fertility and calving ease in Spanish dairy cattle was studied by the traditional inbreeding coefficient (F) and an alternative measurement indicating the inbreeding rate (DeltaF) for each animal. Data included records from 49,497 and 62,134 cows for fertility and calving ease, respectively. Both inbreeding measurements were included separately in the routine genetic evaluation models for number of insemination to conception (sequential threshold animal model) and calving ease (sire-maternal grandsire threshold model). The F was included in the model as a categorical effect, whereas DeltaF was included as a linear covariate. Inbred cows showed impaired fertility and tended to have more difficult calvings than low or noninbred cows. Pregnancy rate decreased by 1.68% on average for cows with F from 6.25 to 12.5%. This amount of inbreeding, however, did not seem to increase dystocia incidence. Inbreeding depression was larger for F greater than 12.5%. Cows with F greater than 25% had lower pregnancy rate and higher dystocia rate (-6.37 and 1.67%, respectively) than low or noninbred cows. The DeltaF had a significant effect on female fertility. A DeltaF = 0.01, corresponding to an inbreeding coefficient of 5.62% for the average equivalent generations in the data used (5.68), lowered pregnancy rate by 1.5%. However, the posterior estimate for the effect of DeltaF on calving ease was not significantly different from zero. Although similar patterns were found with both F and DeltaF, the latter detected a lowered pregnancy rate at an equivalent F, probably because it may consider the known depth of the pedigree. The inbreeding rate might be an alternative choice to measure inbreeding depression.
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            Founder-specific inbreeding depression affects racing performance in Thoroughbred horses

            The Thoroughbred horse has played an important role in both sporting and economic aspects of society since the establishment of the breed in the 1700s. The extensive pedigree and phenotypic information available for the Thoroughbred horse population provides a unique opportunity to examine the effects of 300 years of selective breeding on genetic load. By analysing the relationship between inbreeding and racing performance of 135,572 individuals, we found that selective breeding has not efficiently alleviated the Australian Thoroughbred population of its genetic load. However, we found evidence for purging in the population that might have improved racing performance over time. Over 80% of inbreeding in the contemporary population is accounted for by a small number of ancestors from the foundation of the breed. Inbreeding to these ancestors has variable effects on fitness, demonstrating that an understanding of the distribution of genetic load is important in improving the phenotypic value of a population in the future. Our findings hold value not only for Thoroughbred and other domestic breeds, but also for small and endangered populations where such comprehensive information is not available.
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              Application of individual increase in inbreeding to estimate realized effective sizes from real pedigrees.

              The objective of this study was to test the performance of a recently proposed methodology for the estimation of realized effective size (N(e)) based on individual increase in inbreeding (DeltaF(i)) on several real pedigrees: (a) an experimental mice population; (b) a closed pedigree of fighting bulls; (c) the Spanish Purebred (SPB, Andalusian) horse pedigree; (d) the Carthusian strain of SPB pedigree; (e) the Spanish Arab horse pedigree; and (f) the Spanish Anglo-Arab horse pedigree. Several reference subpopulations were defined on the basis of generation length in order to consider only animals in the last generation, to assess the influence of the pedigree content on the estimates of N(e). The estimates of realized N(e) computed from DeltaF(i) (Ne) tended to be higher than those obtained from regression on equivalent generations. The new parameter Ne remained approximately stable when pedigree depth achieved about five equivalent generations. Estimates of take into account the genetic history of the populations, the size of their founder population, and the mating policy or bottlenecks caused by poor use of reproducing individuals. The usefulness of the realized N(e) computed from individual increase in inbreeding in real pedigrees is also discussed.
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                Author and article information

                Journal
                Open Vet J
                Open Vet J
                Open Veterinary Journal
                Faculty of Veterinary Medicine (Tripoli, Libya )
                2226-4485
                2218-6050
                October 2019
                29 September 2019
                : 9
                : 3
                : 273-280
                Affiliations
                Department of Veterinary Science, University of Pisa, Pisa, Italy
                Author notes
                [* ] Corresponding Author: Prof. Francesca Cecchi. Department of Veterinary Sciences, University of Pisa, Pisa, Italy. francesca.cecchi@ 123456unipi.it
                Article
                OVJ-9-273
                10.4314/ovj.v9i3.14
                6794396
                31998623
                fc0f680e-9524-45d2-8ed1-64a78168b80a
                Copyright @ 2019

                This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License ( http://creativecommons.org/licenses/by-nc/4.0/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.

                History
                : 21 March 2019
                : 31 August 2019
                Categories
                Original Research

                arabian pureblood horses,club foot disorder,inbreeding,incidence

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