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      The role of DNA methylation in syndromic and non-syndromic congenital heart disease

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          Abstract

          Congenital heart disease (CHD) is a common structural birth defect worldwide, and defects typically occur in the walls and valves of the heart or enlarged blood vessels. Chromosomal abnormalities and genetic mutations only account for a small portion of the pathogenic mechanisms of CHD, and the etiology of most cases remains unknown. The role of epigenetics in various diseases, including CHD, has attracted increased attention. The contributions of DNA methylation, one of the most important epigenetic modifications, to CHD have not been illuminated. Increasing evidence suggests that aberrant DNA methylation is related to CHD. Here, we briefly introduce DNA methylation and CHD and then review the DNA methylation profiles during cardiac development and in CHD, abnormalities in maternal genome-wide DNA methylation patterns are also described. Whole genome methylation profile and important differentially methylated genes identified in recent years are summarized and clustered according to the sample type and methodologies. Finally, we discuss the novel technology for and prospects of CHD-related DNA methylation.

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          Emerging coronaviruses: Genome structure, replication, and pathogenesis

          Abstract The recent emergence of a novel coronavirus (2019‐nCoV), which is causing an outbreak of unusual viral pneumonia in patients in Wuhan, a central city in China, is another warning of the risk of CoVs posed to public health. In this minireview, we provide a brief introduction of the general features of CoVs and describe diseases caused by different CoVs in humans and animals. This review will help understand the biology and potential risk of CoVs that exist in richness in wildlife such as bats.
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            Epigenetic regulation of gene expression: how the genome integrates intrinsic and environmental signals.

            Cells of a multicellular organism are genetically homogeneous but structurally and functionally heterogeneous owing to the differential expression of genes. Many of these differences in gene expression arise during development and are subsequently retained through mitosis. Stable alterations of this kind are said to be 'epigenetic', because they are heritable in the short term but do not involve mutations of the DNA itself. Research over the past few years has focused on two molecular mechanisms that mediate epigenetic phenomena: DNA methylation and histone modifications. Here, we review advances in the understanding of the mechanism and role of DNA methylation in biological processes. Epigenetic effects by means of DNA methylation have an important role in development but can also arise stochastically as animals age. Identification of proteins that mediate these effects has provided insight into this complex process and diseases that occur when it is perturbed. External influences on epigenetic processes are seen in the effects of diet on long-term diseases such as cancer. Thus, epigenetic mechanisms seem to allow an organism to respond to the environment through changes in gene expression. The extent to which environmental effects can provoke epigenetic responses represents an exciting area of future research.
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              DNA methylation patterns and epigenetic memory.

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                Author and article information

                Contributors
                dyyyszy@126.com
                yehuiming@xmu.edu.cn
                Journal
                Clin Epigenetics
                Clin Epigenetics
                Clinical Epigenetics
                BioMed Central (London )
                1868-7075
                1868-7083
                26 April 2021
                26 April 2021
                2021
                : 13
                : 93
                Affiliations
                [1 ]GRID grid.12955.3a, ISNI 0000 0001 2264 7233, Department of Clinical Laboratory, Women and Children’s Hospital, School of Medicine, , Xiamen University, ; Xiamen, 361003 People’s Republic of China
                [2 ]GRID grid.12955.3a, ISNI 0000 0001 2264 7233, Prenatal Diagnosis Centre, Women and Children’s Hospital, School of Medicine, , Xiamen University, ; Xiamen, Fujian 361003 People’s Republic of China
                [3 ]GRID grid.12955.3a, ISNI 0000 0001 2264 7233, United Diagnostic and Research Center for Clinical Genetics, School of Medicine, , Xiamen University, ; Xiamen, Fujian 361102 People’s Republic of China
                [4 ]GRID grid.12955.3a, ISNI 0000 0001 2264 7233, School of Public Health, , Xiamen University, ; Xiamen, 361102 People’s Republic of China
                Author information
                http://orcid.org/0000-0003-2069-3644
                Article
                1077
                10.1186/s13148-021-01077-7
                8077695
                33902696
                6e73d097-c2a7-4660-9e59-296ce5b3dd18
                © The Author(s) 2021

                Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver ( http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.

                History
                : 6 February 2021
                : 13 April 2021
                Funding
                Funded by: Joint Funds for Health and Education, Fujian Province
                Award ID: 2019-WJ-35
                Award Recipient :
                Funded by: Joint Research Project of Important and Critical Diseases, Xiamen City
                Award ID: 3502Z20179050
                Award Recipient :
                Funded by: FundRef http://dx.doi.org/10.13039/501100001809, National Natural Science Foundation of China;
                Award ID: 81472031
                Award Recipient :
                Categories
                Review
                Custom metadata
                © The Author(s) 2021

                Genetics
                congenital heart disease,dna methylation,genome methylation level,differentially methylated regions,maternal factors

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