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      Complete Genome Sequences of 14 Salmonella enterica Serovar Enteritidis Strains Recovered from Human Clinical Cases between 1949 and 1995 in the United States

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          ABSTRACT

          Salmonella enterica serovar Enteritidis is one of the most commonly isolated foodborne pathogens and is transmitted primarily to humans through consumption of contaminated poultry and poultry products. We are reporting completely closed genome and plasmid sequences of historical S. Enteritidis isolates recovered from humans between 1949 and 1995 in the United States.

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          Outbreak-associated Salmonella enterica Serotypes and Food Commodities, United States, 1998–2008

          Brendan R. Jackson, Patricia Griffin, Dana Cole … (2013)
          Salmonella enterica infections are transmitted not only by animal-derived foods but also by vegetables, fruits, and other plant products. To clarify links between Salmonella serotypes and specific foods, we examined the diversity and predominance of food commodities implicated in outbreaks of salmonellosis during 1998–2008. More than 80% of outbreaks caused by serotypes Enteritidis, Heidelberg, and Hadar were attributed to eggs or poultry, whereas >50% of outbreaks caused by serotypes Javiana, Litchfield, Mbandaka, Muenchen, Poona, and Senftenberg were attributed to plant commodities. Serotypes Typhimurium and Newport were associated with a wide variety of food commodities. Knowledge about these associations can help guide outbreak investigations and control measures.
          Article 0 comments Cited 157 times – based on 0 reviews     Review now
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            Salmonella enterica serotype Enteritidis and eggs: a national epidemic in the United States.

            Christopher Braden (2006)
            Beginning in the 1970s, the incidence of Salmonella enterica serotype Enteritidis (SE) infection and the number of related outbreaks in the United States has increased dramatically. By 1994, SE was the most commonly reported Salmonella serotype, with an incidence of >10 laboratory-confirmed infections per 100,000 population in the Northeast. Intensive epidemiologic and laboratory investigations identified shell eggs as the major vehicle for SE infection in humans, and that the eggs had been internally contaminated by transovarian transmission of SE in the laying hen. Three key interventions aimed at preventing the contamination and growth of SE in eggs have included farm-based programs to prevent SE from being introduced into egg-laying flocks, early and sustained refrigeration of shell eggs, and education of consumers and food workers about the risk of consuming raw or undercooked eggs. Since 1996, the incidence of SE infection in humans has decreased greatly, although many cases and outbreaks due to SE contaminated eggs continue to occur.
            Article 0 comments Cited 115 times – based on 0 reviews     Review now
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              Rapid Whole-Genome Sequencing for Surveillance of Salmonella enterica Serovar Enteritidis

              Henk C den Bakker, Marc Allard, Dianna J. Bopp … (2014)
              For Salmonella enterica serovar Enteritidis, 85% of isolates can be classified into 5 pulsed-field gel electrophoresis (PFGE) types. However, PFGE has limited discriminatory power for outbreak detection. Although whole-genome sequencing has been found to improve discrimination of outbreak clusters, whether this procedure can be used in real-time in a public health laboratory is not known. Therefore, we conducted a retrospective and prospective analysis. The retrospective study investigated isolates from 1 confirmed outbreak. Additional cases could be attributed to the outbreak strain on the basis of whole-genome data. The prospective study included 58 isolates obtained in 2012, including isolates from 1 epidemiologically defined outbreak. Whole-genome sequencing identified additional isolates that could be attributed to the outbreak, but which differed from the outbreak-associated PFGE type. Additional putative outbreak clusters were detected in the retrospective and prospective analyses. This study demonstrates the practicality of implementing this approach for outbreak surveillance in a state public health laboratory.
              Article 0 comments Cited 67 times – based on 0 reviews     Review now
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                Author and article information

                Journal
                Journal ID (nlm-ta): Genome Announc
                Journal ID (iso-abbrev): Genome Announc
                Journal ID (hwp): ga
                Journal ID (pmc): ga
                Journal ID (publisher-id): GA
                Title: Genome Announcements
                Publisher: American Society for Microbiology (1752 N St., N.W., Washington, DC )
                ISSN (Electronic): 2169-8287
                Publication date (Electronic): 4 January 2018
                Publication date Collection: January 2018
                Volume: 6
                Issue: 1
                Electronic Location Identifier: e01406-17
                Affiliations
                [a ]Office of Research, Center for Veterinary Medicine, U.S. Food and Drug Administration, Laurel, Maryland, USA
                [b ]Center for Food Safety and Applied Nutrition, Division of Microbiology, Office of Regulatory Science, U.S. Food and Drug Administration, College Park, Maryland, USA
                Author notes
                Address correspondence to Daniel A. Tadesse, daniel.tadesse@ 123456fda.hhs.gov .
                Article
                Publisher ID: genomeA01406-17
                DOI: 10.1128/genomeA.01406-17
                PMC ID: 5754494
                PubMed ID: 29301885
                SO-VID: 9e3a30d5-6da2-4281-8eec-6d0d8949759d
                License:

                This is a work of the U.S. Government and is not subject to copyright protection in the United States. Foreign copyrights may apply.

                History
                Date received : 8 November 2017
                Date accepted : 15 November 2017
                Page count
                Figures: 0, Tables: 1, Equations: 0, References: 9, Pages: 3, Words: 1415
                Categories
                Subject: Prokaryotes
                Custom metadata
                cover-date January 2018

                ScienceOpen disciplines: Genetics
                Data availability:
                ScienceOpen disciplines: Genetics

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