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      Formation of cristae and crista junctions in mitochondria depends on antagonism between Fcj1 and Su e/ g

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          Abstract

          Crista junctions (CJs) are important for mitochondrial organization and function, but the molecular basis of their formation and architecture is obscure. We have identified and characterized a mitochondrial membrane protein in yeast, Fcj1 (formation of CJ protein 1), which is specifically enriched in CJs. Cells lacking Fcj1 lack CJs, exhibit concentric stacks of inner membrane in the mitochondrial matrix, and show increased levels of F 1F O–ATP synthase (F 1F O) supercomplexes. Overexpression of Fcj1 leads to increased CJ formation, branching of cristae, enlargement of CJ diameter, and reduced levels of F 1F O supercomplexes. Impairment of F 1F O oligomer formation by deletion of its subunits e/ g (Su e/ g) causes CJ diameter enlargement and reduction of cristae tip numbers and promotes cristae branching. Fcj1 and Su e/ g genetically interact. We propose a model in which the antagonism between Fcj1 and Su e/ g locally modulates the F 1F O oligomeric state, thereby controlling membrane curvature of cristae to generate CJs and cristae tips.

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          The tandem affinity purification (TAP) method: a general procedure of protein complex purification.

          Identification of components present in biological complexes requires their purification to near homogeneity. Methods of purification vary from protein to protein, making it impossible to design a general purification strategy valid for all cases. We have developed the tandem affinity purification (TAP) method as a tool that allows rapid purification under native conditions of complexes, even when expressed at their natural level. Prior knowledge of complex composition or function is not required. The TAP method requires fusion of the TAP tag, either N- or C-terminally, to the target protein of interest. Starting from a relatively small number of cells, active macromolecular complexes can be isolated and used for multiple applications. Variations of the method to specifically purify complexes containing two given components or to subtract undesired complexes can easily be implemented. The TAP method was initially developed in yeast but can be successfully adapted to various organisms. Its simplicity, high yield, and wide applicability make the TAP method a very useful procedure for protein purification and proteome exploration. Copyright 2001 Academic Press.
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            Computational method to predict mitochondrially imported proteins and their targeting sequences.

            Most of the proteins that are used in mitochondria are imported through the double membrane of the organelle. The information that guides the protein to mitochondria is contained in its sequence and structure, although no direct evidence can be obtained. In this article, discriminant analysis has been performed with 47 parameters and a large set of mitochondrial proteins extracted from the SwissProt database. A computational method that facilitates the analysis and objective prediction of mitochondrially imported proteins has been developed. If only the amino acid sequence is considered, 75-97% of the mitochondrial proteins studied have been predicted to be imported into mitochondria. Moreover, the existence of mitochondrial-targeting sequences is predicted in 76-94% of the analyzed mitochondrial precursor proteins. As a practical application, the number of unknown yeast open reading frames that might be mitochondrial proteins has been predicted, which revealed that many of them are clustered.
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              The ATP synthase is involved in generating mitochondrial cristae morphology.

              The inner membrane of the mitochondrion folds inwards, forming the cristae. This folding allows a greater amount of membrane to be packed into the mitochondrion. The data in this study demonstrate that subunits e and g of the mitochondrial ATP synthase are involved in generating mitochondrial cristae morphology. These two subunits are non-essential components of ATP synthase and are required for the dimerization and oligomerization of ATP synthase. Mitochondria of yeast cells deficient in either subunits e or g were found to have numerous digitations and onion-like structures that correspond to an uncontrolled biogenesis and/or folding of the inner mitochondrial membrane. The present data show that there is a link between dimerization of the mitochondrial ATP synthase and cristae morphology. A model is proposed of the assembly of ATP synthase dimers, taking into account the oligomerization of the yeast enzyme and earlier data on the ultrastructure of mitochondrial cristae, which suggests that the association of ATP synthase dimers is involved in the control of the biogenesis of the inner mitochondrial membrane.
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                Author and article information

                Journal
                J Cell Biol
                J. Cell Biol
                jcb
                The Journal of Cell Biology
                The Rockefeller University Press
                0021-9525
                1540-8140
                15 June 2009
                : 185
                : 6
                : 1047-1063
                Affiliations
                [1 ]Adolf-Butenandt Institute for Physiological Chemistry , and [2 ]Center for Integrated Protein Science Munich, Ludwig-Maximilians University, 81377 Munich, Germany
                [3 ]University of Ottawa Heart Institute, Ottawa, Ontario K1Y 4W7, Canada
                [4 ]Max-Planck-Institut für Biochemie, 82152 Martinsried, Germany
                [5 ]Max-Delbrück-Centrum für molekulare Medizin Berlin-Buch, 13092 Berlin, Germany
                [6 ]Institute of Developmental Genetics, Hemholtz Center Munich, German Research Center for Environmental Health, GmbH, 85764 Neuherberg, Germany
                [7 ]Mitochondrial Biology, Cluster of Excellence Frankfurt Macromolecular Complexes, Johann Wolfgang Goethe University Medical School, 60590 Frankfurt am Main, Germany
                Author notes
                Correspondence to Andreas S. Reichert: reichert@ 123456zbc.kgu.de

                R. Rabl and V. Soubannier contributed equally to this paper.

                Article
                200811099
                10.1083/jcb.200811099
                2711607
                19528297
                a8293d3f-671a-4188-b557-abef9f06e946
                © 2009 Rabl et al.

                This article is distributed under the terms of an Attribution–Noncommercial–Share Alike–No Mirror Sites license for the first six months after the publication date (see http://www.jcb.org/misc/terms.shtml). After six months it is available under a Creative Commons License (Attribution–Noncommercial–Share Alike 3.0 Unported license, as described at http://creativecommons.org/licenses/by-nc-sa/3.0/).

                History
                : 19 November 2008
                : 18 May 2009
                Categories
                Research Articles
                Article

                Cell biology
                Cell biology

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