7
views
0
recommends
+1 Recommend
0 collections
    0
    shares
      • Record: found
      • Abstract: found
      • Article: found
      Is Open Access

      DNA Aptamers for the Functionalisation of DNA Origami Nanostructures

      review-article

      Read this article at

      Bookmark
          There is no author summary for this article yet. Authors can add summaries to their articles on ScienceOpen to make them more accessible to a non-specialist audience.

          Abstract

          DNA origami has emerged in recent years as a powerful technique for designing and building 2D and 3D nanostructures. While the breadth of structures that have been produced is impressive, one of the remaining challenges, especially for DNA origami structures that are intended to carry out useful biomedical tasks in vivo, is to endow them with the ability to detect and respond to molecules of interest. Target molecules may be disease indicators or cell surface receptors, and the responses may include conformational changes leading to the release of therapeutically relevant cargo. Nucleic acid aptamers are ideally suited to this task and are beginning to be used in DNA origami designs. In this review, we consider examples of uses of DNA aptamers in DNA origami structures and summarise what is currently understood regarding aptamer-origami integration. We review three major roles for aptamers in such applications: protein immobilisation, triggering of structural transformation, and cell targeting. Finally, we consider future perspectives for DNA aptamer integration with DNA origami.

          Related collections

          Most cited references103

          • Record: found
          • Abstract: found
          • Article: not found

          A logic-gated nanorobot for targeted transport of molecular payloads.

          We describe an autonomous DNA nanorobot capable of transporting molecular payloads to cells, sensing cell surface inputs for conditional, triggered activation, and reconfiguring its structure for payload delivery. The device can be loaded with a variety of materials in a highly organized fashion and is controlled by an aptamer-encoded logic gate, enabling it to respond to a wide array of cues. We implemented several different logical AND gates and demonstrate their efficacy in selective regulation of nanorobot function. As a proof of principle, nanorobots loaded with combinations of antibody fragments were used in two different types of cell-signaling stimulation in tissue culture. Our prototype could inspire new designs with different selectivities and biologically active payloads for cell-targeting tasks.
            Bookmark
            • Record: found
            • Abstract: found
            • Article: not found

            A DNA-fuelled molecular machine made of DNA.

            Molecular recognition between complementary strands of DNA allows construction on a nanometre length scale. For example, DNA tags may be used to organize the assembly of colloidal particles, and DNA templates can direct the growth of semiconductor nanocrystals and metal wires. As a structural material in its own right, DNA can be used to make ordered static arrays of tiles, linked rings and polyhedra. The construction of active devices is also possible--for example, a nanomechanical switch, whose conformation is changed by inducing a transition in the chirality of the DNA double helix. Melting of chemically modified DNA has been induced by optical absorption, and conformational changes caused by the binding of oligonucleotides or other small groups have been shown to change the enzymatic activity of ribozymes. Here we report the construction of a DNA machine in which the DNA is used not only as a structural material, but also as 'fuel'. The machine, made from three strands of DNA, has the form of a pair of tweezers. It may be closed and opened by addition of auxiliary strands of 'fuel' DNA; each cycle produces a duplex DNA waste product.
              Bookmark
              • Record: found
              • Abstract: found
              • Article: not found

              Aptamers as targeted therapeutics: current potential and challenges

              Nucleic acid aptamers offer several advantages over traditional antibodies, but their clinical translation has been delayed by several factors, including insufficient potency, lack of safety data and high production costs. Here, Zhou and Rossi provide an overview of aptamer generation, focusing on recent technological advances and clinical development, as well as challenges and lessons learned.
                Bookmark

                Author and article information

                Journal
                Genes (Basel)
                Genes (Basel)
                genes
                Genes
                MDPI
                2073-4425
                23 November 2018
                December 2018
                : 9
                : 12
                : 571
                Affiliations
                [1 ]Malopolska Centre of Biotechnology, Jagiellonian University, 30-387 Krakow, Poland; yusuke.sakai@ 123456uj.edu.pl (Y.S.); md.sirajul.islam@ 123456uj.edu.pl (M.S.I.); martyna.adamiak@ 123456uj.edu.pl (M.A.)
                [2 ]School of Biomedical Sciences, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Hong Kong, China; simon.chichin.shiu@ 123456gmail.com (S.C.-C.S.); jatanner@ 123456hku.hk (J.A.T.)
                Author notes
                [* ]Correspondence: jonathan.heddle@ 123456uj.edu.pl ; Tel.: +48-12-664-6119
                Author information
                https://orcid.org/0000-0001-8841-2218
                https://orcid.org/0000-0003-0994-9928
                Article
                genes-09-00571
                10.3390/genes9120571
                6315403
                30477184
                bbef3504-bb15-4944-8f45-4b575b5a3e87
                © 2018 by the authors.

                Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license ( http://creativecommons.org/licenses/by/4.0/).

                History
                : 05 October 2018
                : 19 November 2018
                Categories
                Review

                dna origami,aptamer,dna nanotechnology,protein nano array,biosensor,logic gate,enzyme cascade,drug delivery system,targeted therapy,molecular robotics

                Comments

                Comment on this article